| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0487 |
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| Symbol | |
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| ID | 5732386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 566338 |
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| End bp | 568341 |
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| Gene Length | 2004 bp |
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| Protein Length | 667 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641277613 |
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| Product | transketolase |
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| Protein accession | YP_001543266 |
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| Protein GI | 159897019 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0021] Transketolase |
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| TIGRFAM ID | [TIGR00232] transketolase, bacterial and yeast |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.33279 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACTCAAG CACATACACT CGATGAACGG GCCATCAATA CAATCCGCAT GTTGTCGGTT
GATGGTGTGC AAGCGGCTAA TTCGGGCCAC CCAGGTTTAC CAATGGGGGC AGCGGCCATG
GCTTATGTGC TCTGGACGCG CCACCTCAAA CATAATCCGG CTAATCCAGA TTGGGCTGAT
CGCGACCGCT TTGTGCTGTC GGCGGGCCAT GGCTCAATGC TGTTGTATAG TTTGTTGCAT
CTCACGGGCT ATGATCTTTC GCTCGATGAT TTGAAGAATT TCCGCCAATG GCATAGTAAA
ACCGCTGGTC ACCCAGAATA TGGTTATGCC GCCGGCATCG AAACCACAAC TGGGCCACTT
GGCCAAGGAT TTGCCACGGG CGTGGGTATG GCGATTGCTG CCCGTCACTT AGCAGGCACG
TTCAATCAGC CTGAACTCGA AATCGTCAAG CATCATATTT ATGCGATTGT CTCCGATGGC
GATTTGGAAG AGGGGATTAG CGCCGAAGCT GCTTCGTTGG CAGGTCACCT CAAATTGGGC
GAACTTATCT ATCTGTATGA TGATAACGAA ATTTCGATTG AAGGCGATAC CTCAATTGCC
TTTACCGAAG ATGTGCCAGC CCGTTTCCGC GCCTATGGCT GGCATGTCCA AGAGATCGAC
GGGCTTGATC CTGAGCAAGT TGATGCAGCC TTGCATGCTG CCAAAGCGGT GACCGATCAG
CCATCGTTGA TTGTGGCTCA CACCGTGATT GGCTTTGGCT CGCCCAATCG GGCTGGCACG
GCCAAAGCTC ACGGCTCGCC GCTCGGCCCC GATGAAGTTA AATTGACCAA GGAAGCGCTT
GGTTGGCCGC TCGAACCAAC CTTCTACATT CCTGAAGAAG TCTTGGCCCA CTTCCGCCAA
GCCTTGGATC ATGGTGCGGC GGCAGAGCAA GCCTGGAACG AATTGCTCGA ACGCTACACG
GCGGCGCATC CTGAAAAAGC TGCTGATTTC AAGCAACGCA TGTCGGGTGA ATTGCCAGCA
GGTTGGGATA GTACCTTGCC AGTTTGGCCA GCTGATGCCA AAGGCGTGGC AACCCGCAAA
TCATCAGAAA CTGCCTTGAA TGCCTTGGCC GAGCAAATTC CAGCGCTCAT TGGCGGCTCA
GCTGATTTGG CCGAATCGAC CTTTACCTTG ATCGAGCATG CTCAATCGTT CCAAGCCGAT
ACGCCGCAAG GCCGCAATAT GCACTGGGGG ATTCGTGAGC ATGCTATGGT TGCTGCCGTC
AACGGGATGG CGTTGCATGG CGGCACGATT CCTTACGGCG CAACCTTCTT GGTTTTCAGC
GATTATTGCC GTGCCTCGAT TCGCTTGGCA GCCTTGATGG GCATTCGCAC GATTCAAGTC
TTTACTCACG ATAGCATTGG GGTTGGCGAA GACGGCCCAA CCCACCAACC AATCGAACAC
ATTCCATCGT TGCGGATTAT CCCCAATTTG AATGTGATGC GGCCTGGTGA TGCCAACGAA
ACCAGCCAAG CTTGGCGCGT AGCAGTCAGC CATAAAGGCC CAACCTTGCT GGCCTTGACC
CGCCAAAACT TACCAACGCT TGATCGCACC CGCTATGCCT CGGCTGAGGG TGTGGCTCAA
GGTGGCTATG TCTTGGCTGA TAGCGCTGGT CAACCAGAAT TAATCATCAT TGCAACTGGC
TCGGAATTGC AACATGCCGT GGCGGCCTAC GAGCAATTGA GTGGCGAAGG AGTCAAGGTA
CGGGTGGTCA GTATGCCATC AACCTTGCTG TTCGACGCTC AGTCAGTGGA ATATCGCGAG
AGCGTACTGC CCAAGGCTGT GACCAAACGG ATTGCGATTG AAGCTGCGCA TCCCGTGACC
TGGTATAAAT ATGTTGGGAC TGAGGGCGAT ATTATTGGGA TTGATCACTT CGGTGCTTCA
GCGCCAATTA ATATTTTGAT GAAGGAATTT GGCTTTACCG CCGAAAACCT GATTGCTCGT
GCCAAGGCCT TGTTGGCCAA ATAA
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| Protein sequence | MTQAHTLDER AINTIRMLSV DGVQAANSGH PGLPMGAAAM AYVLWTRHLK HNPANPDWAD
RDRFVLSAGH GSMLLYSLLH LTGYDLSLDD LKNFRQWHSK TAGHPEYGYA AGIETTTGPL
GQGFATGVGM AIAARHLAGT FNQPELEIVK HHIYAIVSDG DLEEGISAEA ASLAGHLKLG
ELIYLYDDNE ISIEGDTSIA FTEDVPARFR AYGWHVQEID GLDPEQVDAA LHAAKAVTDQ
PSLIVAHTVI GFGSPNRAGT AKAHGSPLGP DEVKLTKEAL GWPLEPTFYI PEEVLAHFRQ
ALDHGAAAEQ AWNELLERYT AAHPEKAADF KQRMSGELPA GWDSTLPVWP ADAKGVATRK
SSETALNALA EQIPALIGGS ADLAESTFTL IEHAQSFQAD TPQGRNMHWG IREHAMVAAV
NGMALHGGTI PYGATFLVFS DYCRASIRLA ALMGIRTIQV FTHDSIGVGE DGPTHQPIEH
IPSLRIIPNL NVMRPGDANE TSQAWRVAVS HKGPTLLALT RQNLPTLDRT RYASAEGVAQ
GGYVLADSAG QPELIIIATG SELQHAVAAY EQLSGEGVKV RVVSMPSTLL FDAQSVEYRE
SVLPKAVTKR IAIEAAHPVT WYKYVGTEGD IIGIDHFGAS APINILMKEF GFTAENLIAR
AKALLAK
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