Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0482 |
Symbol | |
ID | 5732381 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 560607 |
End bp | 561275 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641277608 |
Product | von Willebrand factor type A |
Protein accession | YP_001543261 |
Protein GI | 159897014 |
COG category | [R] General function prediction only |
COG ID | [COG4245] Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAATACG GATTAGAAAG CCCAATCAAC TACGAACAAA AATGTCTGTG CATTCTAGTT GTTGATACAT CAGGATCGAT GCAAGGCAGG CCTATTGATG AATTGAATCA AGGTTTACAA GTATTTCATC AAGATATTAG CAATAGTTTT TCAACTGCCC AACGACTAGA AATCTGCCTT GTTGAATTCA ATAGTCAAGC TGATTGTATT GTTGAGCCTA GCTTAGTCGA TCAATTTCAT ATGCCGATTT TGGCTGTTGC TGGCACAACC AAGTTGGTTG ATGGGGTTAG GCTAGCGATT CATAAAGTCC AGGAACGCAA AAGCTGGTAT CGTTCAACCG GACAACCCTA TTATCGGCCT TGGATTATTT TAATGACTGA TGGTGAGCCA GATAGCGATC AAGATGTGGC TGGCTTGGCG CGTGAGATTC AGCATGGGGT CAACAATAAA CAATTTGTCT TTTTTCCAAT TGGGGTACAA GGGGCTGATA TGCGTATGTT GCAACAGATT AGCACCCCTG ATCGTCCTCC GATGCTGTTG CAAGGTTTAC GCTTTGAAGC ATTTTTTGAC TGGTTAAGTG CAAGCCTATC AATGGTTGCC AGTTCAACTG ATGGTCAAGT TATTCAGTTA CCATCAACAA GCGGTTGGGG AATTCTTCCC GTATCCTAA
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Protein sequence | MEYGLESPIN YEQKCLCILV VDTSGSMQGR PIDELNQGLQ VFHQDISNSF STAQRLEICL VEFNSQADCI VEPSLVDQFH MPILAVAGTT KLVDGVRLAI HKVQERKSWY RSTGQPYYRP WIILMTDGEP DSDQDVAGLA REIQHGVNNK QFVFFPIGVQ GADMRMLQQI STPDRPPMLL QGLRFEAFFD WLSASLSMVA SSTDGQVIQL PSTSGWGILP VS
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