Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0445 |
Symbol | |
ID | 5732344 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 522543 |
End bp | 523175 |
Gene Length | 633 bp |
Protein Length | 210 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641277571 |
Product | HAD family hydrolase |
Protein accession | YP_001543224 |
Protein GI | 159896977 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000016642 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAT ACAAACTAGT GCTGTTTGAT TTTGATGGAA CCTTGGCCGA TTCAATTCCT TGGTTGGTCA AGGCGATCAA CGGCGTGGCC GAGAAATATA AGTTTCGCCA ACTTACGCCC AAGGAATTTA CCGAGTTGCG CGGCCAAAAC CCCCGCGAGG TGATGAAATA TATGCAGGTG GCTTGGTGGA AAGTGCCATT AATTGCCCGC CATATGCGCC AACTGGCCGC CCAGAATATT CGCCATATTC AGCTTTTCGA TGGCATGGAA TTGATTTTGG CTCAATTGGA TGCTGCTGAT GTGCGTTTGG GCGTGGTCAG CAGTAATAGC GAAGAGAATG TACGCCATGT GTTGGGTGAT GCCTTGGCCA ATGTGGTTGA GTTTTACGAA TGTAGCGTGC CAATTTTTCG CAAACGTGCC CGTTTTGAGC GAATTGTGCG CAAAGCTAAC CTTGAGCGCG AAAAAATTCT ATGCGTTGGC GATGAGATTC GCGATGCTGA GGCGGCCAAG CAAGCTCAAT TGGCCTTTGG TGCGGTGGGC TGGGGCATGA GCCGCATTCA AGATTTTGCC CCCTATGCGC CGCGCGAAGT GTTTTTTCAG GTTTCCGATA TTGCCACCCG CCTGATCGAT TGA
|
Protein sequence | MKKYKLVLFD FDGTLADSIP WLVKAINGVA EKYKFRQLTP KEFTELRGQN PREVMKYMQV AWWKVPLIAR HMRQLAAQNI RHIQLFDGME LILAQLDAAD VRLGVVSSNS EENVRHVLGD ALANVVEFYE CSVPIFRKRA RFERIVRKAN LEREKILCVG DEIRDAEAAK QAQLAFGAVG WGMSRIQDFA PYAPREVFFQ VSDIATRLID
|
| |