Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0438 |
Symbol | |
ID | 5732337 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 513139 |
End bp | 514203 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641277564 |
Product | heat-inducible transcription repressor HrcA |
Protein accession | YP_001543217 |
Protein GI | 159896970 |
COG category | [K] Transcription |
COG ID | [COG1420] Transcriptional regulator of heat shock gene |
TIGRFAM ID | [TIGR00331] heat shock gene repressor HrcA |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.000928252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCATCTTG AACTCAATGA GCGGCGACGA CGGGTTCTTA AGGCGGTTAT TCAACAATAC ATCGATACGG CAACGCCAGT AGCCTCGCAA GACCTTGCTA GGAGTTTGGG GGTTAGTTCG GCGACTGTCC GCAACGAAAT GGCGGCGTTA GAAGATGCTG GCCTGTTGAC GCATTTGCAT ACCTCGGCTG GGCGTTTGCC AACTGATGCT GGCTATCGCT TTTTTGTCGA AAATTTGATG GATCGGGCGG CGCTTTCGAC CCAAGAACAG CGCATGATCC AACATCAGTT TTATCAAATC CGCTCGGAAT TGAACCAATG GATTCATTTG GCAGCAGCGG TTTTGGCTCG CACCGCCCAA ACGGCGGCGG TGGTTACGCC CCCGCGAGCC TACGAGAGCC GCTTCAAACA TATCGAGTTA ATTTCAATCA ACGATGCCTT GGTCTTGTTG GTGTTGGTGT TGCACGAAGG CTCGGTCAAG CAGCAAACGC TGCCTGCCGA CCCCAATACG ACCCAAGAGC AACTAAGCCG CATCGCCGGA CGAATTAATG AGTTGTGTCA TGAAGCCTCA GCCAAGGCGA TTGCCAACAT CGCTCACAAT CAGTCAACCA ACCAGCCGCC GCTTAGCAGT TTTGAAGTGC TGGTGATCGA GAGCGTGGCG CGGGCCATGC AACAATTCGA GGAGCATGTC AACGAATTAA TTCATCACGA TGGCCTGCTA GAGATGTTGC ATCAACCAGA ATTTGGCCAG GTGACGCGGG TACGCGAGGT GCTTTCGATC CTTGAAGGCG GCACCATGCT TGAGTCGTTG ATTCCCCAAG CCTTGGCTTC GGATGGCGTG CAAGTGATCA TCGGTGGTGA ACATAGCCGC GATGAACTGC GCGACTATAG CGTGATTTTG TCGCGTTACG GGGTCAATGG CGATGTTGCT GGTGTGGTAG GGGTTTTAGG GCCGCGTCGC ATGGCCTATC CACGTTCCAT CTCCAGCGTG CGTTATATTG CTGGCGTGAT GAGCGATTTG ATGGGCGATT TATATGGCGA ACGCAAAATA GAACCATCAG AATAG
|
Protein sequence | MHLELNERRR RVLKAVIQQY IDTATPVASQ DLARSLGVSS ATVRNEMAAL EDAGLLTHLH TSAGRLPTDA GYRFFVENLM DRAALSTQEQ RMIQHQFYQI RSELNQWIHL AAAVLARTAQ TAAVVTPPRA YESRFKHIEL ISINDALVLL VLVLHEGSVK QQTLPADPNT TQEQLSRIAG RINELCHEAS AKAIANIAHN QSTNQPPLSS FEVLVIESVA RAMQQFEEHV NELIHHDGLL EMLHQPEFGQ VTRVREVLSI LEGGTMLESL IPQALASDGV QVIIGGEHSR DELRDYSVIL SRYGVNGDVA GVVGVLGPRR MAYPRSISSV RYIAGVMSDL MGDLYGERKI EPSE
|
| |