| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0436 |
|---|
| Symbol | |
|---|
| ID | 5732335 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 508780 |
|---|
| End bp | 509568 |
|---|
| Gene Length | 789 bp |
|---|
| Protein Length | 262 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641277562 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543215 |
|---|
| Protein GI | 159896968 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3694] ABC-type uncharacterized transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCGTT ATAGCAAAAT CTATTGGTAT TTCGTCGTTC AGCGTTTCAA AATTTTGATG
GAATATCGGC TGAATTTTTT TATTGGCTCG ATTTCAACCG TGCTATTTCA AGGTGCGAGC
ATTATTGCAA TGTGGGCAGT TTTGCGCCAA GTTCCAAGCA TCCAAGGCTG GACACTTGAG
CAAATTCTAC TAATTTACGG CTTGTTGACC TTATCCAAAG GCATCAATCA TTTGTTTGCT
GATAATCTTT GGGTGATTGG GCGCGATTAT ATTCGACCTG GCCAATTTGA TCGTTTTTTG
GTGCGGCCAA TTAATCCATT ATTCCATTTA TTAGCCGATC GAATTTGTCA TGATGCGATT
GGTGATTTTA TTGTCGGCTT TGGCTTGGTT GGTTATGCAA TGGTCAAGTT ACAATTACCA
ATTACCCTGG CAAGCATTAG TTTTATCATA TTAATGGTTA TCAGTGGGGG CATTATTTTT
ATTGCGCTGA ATTTAATCAC TGCGGCAACT GCTTTTTGGA TTATGGATTC AATTCCGGTA
ACCAATCTAG TGTTCAGCAC CAATGAATTT GCGCAATATC CGCTAACCTT TTATCATCGC
TCAGTCGGCA TTTTATTGAC ATGGCTGTTA CCATATGGCT TTGCCTCGTA TTATCCGGCC
AGCTATTTAC TCGGCCACTC GATTGGCTGG ATGGCATGGC TGGCTCCGCT GATAGCGCTC
GTGAGTATCA CCATTGCCTA TCGCTTTTGG GTATTTGGCC TCAAACACTA CGGCAGCACT
GGCTCGTGA
|
|---|
| Protein sequence | MLRYSKIYWY FVVQRFKILM EYRLNFFIGS ISTVLFQGAS IIAMWAVLRQ VPSIQGWTLE
QILLIYGLLT LSKGINHLFA DNLWVIGRDY IRPGQFDRFL VRPINPLFHL LADRICHDAI
GDFIVGFGLV GYAMVKLQLP ITLASISFII LMVISGGIIF IALNLITAAT AFWIMDSIPV
TNLVFSTNEF AQYPLTFYHR SVGILLTWLL PYGFASYYPA SYLLGHSIGW MAWLAPLIAL
VSITIAYRFW VFGLKHYGST GS
|
|---|
| |