Gene Haur_0427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0427 
Symbol 
ID5732326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp498262 
End bp499215 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content51% 
IMG OID641277553 
ProductABC transporter related 
Protein accessionYP_001543206 
Protein GI159896959 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGAAT TAGCGATCCA AACTGTTGAT TTGTTGCGGC GCTATGGCAA ATACACTGCT 
GTCAACAAGC TTAATTTGAA GATCACACTT GGTAGCATTT TTGGATTTCT TGGCCCAAAT
GGTGCTGGCA AAACCACAAC CCTGCGCATG CTAGCAGGCT TGTTGGAGCC AAGCAGCGGT
CAGGTATTTT TGCATGGCCA ACTAATTCAA AAAACCAGCA CAGCTGCCGC AATCGTCGGC
TATATGCCTG ATTTCTTCGG GGTTTACGAT GATCTGCGGG TCTGGGAATA TCTCGATTTC
TATGCCCGTT GCCATGGCAT TGAGCCAGCC AAGCGCAAAA GCACGGTCGA TGGCCTGCTC
GATTTGGTTG ATCTCAGCGA AAAACGCAAT GCCTTTGTGC AACACCTAAG CCGTGGCATG
CAACAGCGTT TATGTTTGGC CCATGCCTTG GTGCACGACC CCAAAATTTT ATTGCTCGAC
GAGCCGGCCA GCGGCCTCGA CCCCCAAGCG CGGGTTGAGT TGCGCGAATT GCTGCGCACC
CTGCGCGATA TGGGCAAAAC AATTATTCTT AGCTCGCATA TCTTGAATGA GCTTGAAGAT
ATTTGTACCG ATTTTGGCAT TATGGCCCGT GGTGAATTGC TGGCTCAGGG TTCGCTTGAA
ACCTTACGCC AACGGAGCCG TCCGGCCCTG CAAATTAAAG TGCTCGATGA TCTTGATCGC
GCGATGCGCT TGATTGCTGC TCAATCGGGA GTTTTGCGGG TACTCGAACC AGCCGAAGCC
ACGCCCATGC TGATCGAGGT GGAATTTGAT GGCGATGAGC AGCAAGCCTC ACAATTATTG
CTCAATCTAG CGCGGGCCGA GCTACCAATT GCCGATTTTC ATCGTGAGGA CGATTCGCTA
GAACGGCTGT TTTTGCAGCT TGTCAACAAC CATGGTCTGG AGGAACGAGT ATGA
 
Protein sequence
MSELAIQTVD LLRRYGKYTA VNKLNLKITL GSIFGFLGPN GAGKTTTLRM LAGLLEPSSG 
QVFLHGQLIQ KTSTAAAIVG YMPDFFGVYD DLRVWEYLDF YARCHGIEPA KRKSTVDGLL
DLVDLSEKRN AFVQHLSRGM QQRLCLAHAL VHDPKILLLD EPASGLDPQA RVELRELLRT
LRDMGKTIIL SSHILNELED ICTDFGIMAR GELLAQGSLE TLRQRSRPAL QIKVLDDLDR
AMRLIAAQSG VLRVLEPAEA TPMLIEVEFD GDEQQASQLL LNLARAELPI ADFHREDDSL
ERLFLQLVNN HGLEERV