| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0421 |
|---|
| Symbol | |
|---|
| ID | 5732320 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 492687 |
|---|
| End bp | 493778 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641277547 |
|---|
| Product | glucose sorbosone dehydrogenase |
|---|
| Protein accession | YP_001543200 |
|---|
| Protein GI | 159896953 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2133] Glucose/sorbosone dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000245782 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCTT TTTGGCATAC CTATCAACGG GTCAAACATG GCAGTTGGAG CTTGGTTTTG
GGCTTGGCTT TGGTAGCTTG CTCAATTCCA GTCAATTACT CCTCGGATAA TCCACCAACT
AGCCCACCAG CCGAACTTCA AATCGCAGCA GGATTCACAA TTACCCCCAT TATTACTGGC
CTTGATCAGC CAACTGGACT AGCCTTTGAT CCCCAAGGGC GTTTGTATAT TGCCCAACGC
TCAGGCACTG TGCTGATCAG CGACGGAACC AACCCACCCC GCGAGTACGC AACTGATTTC
AATAAGCCCT TGAGTTTGCA TTGGTATGAG CAGGCGTTGT ATGTGGTTGA GCAAGGCCAA
ATTCAGCGCT TGAGCGACGG CAATAGCGAT GGGATCGTCG ATCAGCAAAC GGTTTTATTG
AGCGATCTGC CTGATCAAAT TGAGGCGGCC ACGCTGGTTT CCGATGCGCA GGGTTGGCTC
TATCTCGGTG TAGGAACACG TGCTGATCAT ACGGCAACCG CCGGAATTCA AGAGGGTTAT
ATTCGGCGTT TTCGCGCCGA TGGCAGCGAA TCGAGCGTGT ATGCAACTGG TTTACGCATG
CCGTTTGGCC TAGCCTTCGA CCCACAGCAA CAGCTTTATG CCACCGATAA CGGGCGCGAA
GGCCTTGGCG ATGATCTTCC TCCCGATGAG GTAAATCGAA TCACGGCTGG AGCCGATTAT
GGTTGGCCGC GCTGTTGGGG CCAGCGCCAG CCCGATGCTG ATGGCGGCGG TGATGCGGCC
AACTGTTCGA CCACCAACGA GCCAGTTGCG TTGTTGCCTG CCCATAGCGG TGTAACCGGA
ATTGTCTTCT ATCAGGGCAC AGCGTTTCCC GCCAGATATC ACGGCGATGC CTTCATTGGC
TTATCCGGTT CATGGTATAG CCAAGAATTA CGGGGCCATA GCATCGTCCG CATGGATGCC
GAAACACAGC AGATTGAGTC ATTCGCCAGT GGTTTTGGCC GACCTGTTGG TTTAGCGATT
AGCCCGCAAG GCCAATTGTT GGTCGCTGAT TATGACCGTG GCACCATCGT AATGATTGCC
GCCCCACCTT AA
|
|---|
| Protein sequence | MLAFWHTYQR VKHGSWSLVL GLALVACSIP VNYSSDNPPT SPPAELQIAA GFTITPIITG
LDQPTGLAFD PQGRLYIAQR SGTVLISDGT NPPREYATDF NKPLSLHWYE QALYVVEQGQ
IQRLSDGNSD GIVDQQTVLL SDLPDQIEAA TLVSDAQGWL YLGVGTRADH TATAGIQEGY
IRRFRADGSE SSVYATGLRM PFGLAFDPQQ QLYATDNGRE GLGDDLPPDE VNRITAGADY
GWPRCWGQRQ PDADGGGDAA NCSTTNEPVA LLPAHSGVTG IVFYQGTAFP ARYHGDAFIG
LSGSWYSQEL RGHSIVRMDA ETQQIESFAS GFGRPVGLAI SPQGQLLVAD YDRGTIVMIA
APP
|
|---|
| |