| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0409 |
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| Symbol | |
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| ID | 5732305 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 479199 |
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| End bp | 480437 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641277532 |
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| Product | SufS subfamily cysteine desulfurase |
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| Protein accession | YP_001543188 |
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| Protein GI | 159896941 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | [TIGR01979] cysteine desulfurases, SufS subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGTAC AAACAACCCT TGATATTCAG GCCATTCGCG AGCAATTCCC GCTCTTGGAT
CAATCGATTA ACGGCCATCG CCTAGCCTAT TTGGATAGCA CCGCAACTGC CCAAAAGCCG
CTAGCAGTGC TTGATGCGAT GGATCGCTAT TATCGCACGA TTAATGCGAA TGTTCATCGA
GGTGTGTATC AGATTAGCGA AGCCGCCACC GAAGCCTATG AAGGCACGCG CCGCACGATT
GGCCGCTTTA TCGGCGCAAA ATCGACCAAA GAAATTATTT TTACTCGCAA CGCGACCGAA
GCGATTAACT TGGTTGCCCA AAGCTGGGGC CGTGCTAATT TGCAAGCGGG CGATCGAATT
TTGCTCACAG TCAGCGAGCA TCATTCAAAT TTAGTGCCAT GGCAATTGCT AGCAGCCCAA
ACTGGTGTAG AGCTTGATTT TATCGAGCTT GATGATCAAG GCCGACTTGA TCTCAGCCAC
CTTGATCAAC TATTGACTGA ACGCACCAAA TTGGTCGCCA TGACCCACAT GTCGAATGTG
TTGGGCACGA TCAATCCAGT TGAACGGGTG ATTGCGGCGG CCAAACAGGT TGGAGCCTTG
GTGCTGCTGG ATGGGGCGCA AAGTGTGCCA CATATTCCCG TCAATGTTCA AGCACTTGGC
TGCGATTTCT TGGCCTTTTC GGGGCATAAA ATGTGCGGTC CAACTGGGAT TGGGGTGCTG
TGGGCGCGGC GCGAATTGCT TGAAGCCATG CCGCCGTTTA TGGGTGGCGG CGATATGATC
AAACGGGTCG GGCTACGCGA AAGCTCATGG AACGATCTCC CATGGAAATT CGAGGCAGGC
ACGCCAGCGA TTGCCGAGGC GATTGGCCTT GGCGCGGCGA TTGACTTCTT GAATGAACTT
GGGATGCAGG CGATTCACGA GCGCGAACGC CAATTGACCC ACTACGCTTG GGATAAACTC
AGCGCCATCG ATGGGTTGAC CATTTTTGGT CCACCTGCTG CCGAGCGCGG TGGCTTGTTG
AGCTTTACCC TTGCAGGTGT GCATGCCCAC GATGTGGCAG CGATTCTCGA TACCCAAGGG
ATTGCAGTGC GGGCTGGGCA TCATTGCACC CATCCATTGC ACGATATTTT TGGCGTGCCA
GCAACGGTAC GCGCATCATT CTACCTATAC ACGCTTGAGG AAGAAATTGA TCGTTTGGCC
GAAGCCTTGG TTTTGGCTCG CGATACCTTC CAACTGTGA
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| Protein sequence | MSVQTTLDIQ AIREQFPLLD QSINGHRLAY LDSTATAQKP LAVLDAMDRY YRTINANVHR
GVYQISEAAT EAYEGTRRTI GRFIGAKSTK EIIFTRNATE AINLVAQSWG RANLQAGDRI
LLTVSEHHSN LVPWQLLAAQ TGVELDFIEL DDQGRLDLSH LDQLLTERTK LVAMTHMSNV
LGTINPVERV IAAAKQVGAL VLLDGAQSVP HIPVNVQALG CDFLAFSGHK MCGPTGIGVL
WARRELLEAM PPFMGGGDMI KRVGLRESSW NDLPWKFEAG TPAIAEAIGL GAAIDFLNEL
GMQAIHERER QLTHYAWDKL SAIDGLTIFG PPAAERGGLL SFTLAGVHAH DVAAILDTQG
IAVRAGHHCT HPLHDIFGVP ATVRASFYLY TLEEEIDRLA EALVLARDTF QL
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