Gene Haur_0403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0403 
Symbol 
ID5731971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp474076 
End bp474663 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content49% 
IMG OID641277526 
ProductTetR family transcriptional regulator 
Protein accessionYP_001543182 
Protein GI159896935 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGGAA ACGTGGTTAA AGTTGACCCG CGCACCAAGC GCACCCGTAA ATTAATTCTT 
GATGCTTTGA TTCAACTCTT GCGCACCCAT ACCTTCGAGG AAGTCACGGT CAATGAGATT 
GCCGAAGCAG CAACGATCAA TCGTGCAACC TTTTATGCCC ATTTCAGCGA TAAATATGCC 
TTGGTCGATG AGCTAATTCG TGATGGCTTT ATGCTGTATC TTGATCGACG CATGCAGCAT 
TATCCTGATA CGCCGACGCG CTATATGCAA GCTTTGCTCT GGGCGATCGC CGACCACTGG 
GCGATGATCC ATGGTCAATG CAATCAATAT CATCGCTTTT TCGATTCGCT GGCCGAAAAT 
CAGATCAAAC GCATGCTGGA GCAGCATATT CAAACTTGGC TTGATCATTA TGGGCCGCTG 
CGCAACGTGC CAGCCATGCA ACGCCAATTA TTAGCAACCA TGCTGAGTTG GTCGGTCTAT 
GCTTTGGTTG CCCGCTGGCT GTATAGCGAC CGCTGCCAAA ACCTCGAACA TTTTATCAAT 
GATAGCGTGC CCTTGCTGGT TGGCAGTATC GAAGCGTTGA AAGGATGA
 
Protein sequence
MLGNVVKVDP RTKRTRKLIL DALIQLLRTH TFEEVTVNEI AEAATINRAT FYAHFSDKYA 
LVDELIRDGF MLYLDRRMQH YPDTPTRYMQ ALLWAIADHW AMIHGQCNQY HRFFDSLAEN 
QIKRMLEQHI QTWLDHYGPL RNVPAMQRQL LATMLSWSVY ALVARWLYSD RCQNLEHFIN 
DSVPLLVGSI EALKG