Gene Haur_0396 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0396 
Symbol 
ID5731964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp464627 
End bp465529 
Gene Length903 bp 
Protein Length300 aa 
Translation table11 
GC content53% 
IMG OID641277519 
ProductLysR family transcriptional regulator 
Protein accessionYP_001543175 
Protein GI159896928 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.21777 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTGGATT TACAAAAATT ACGGATGTTT GTGGCAGCGG CGCAAAGTCG CAATTTTACC 
CGCGCTGCCG AGCAACTTGA CCTAACTCAA CCAACCGTGA GCCAGCAAAT TCAAACGCTT
GAGCGCGAAT TAGGCGTTAG TTTGTTTGAG CGGCTAAGTC GTGGAATTGA GCTAACAGCG
GCTGGGCGGG CGCTCTTGCC GCATGCCGAG CAAATGATCG CCCTCGAACG GATTGCCGAG
CAAGCAGTGC GGGCTGCGGC TGGTCAAAGT GAACGTACCT TGCTCTTGGG CGTTGGCAAT
ACCTTGGCAA CCTATGCCCT GCCCGATTTG CTGCAACGCT TCAACTGGGA ACACCCTGCG
TTTGTGGTGC ATATTGGCAC AGGCAACACG GAACAATTGC TGGCTCAAGT CATTTCGGGC
GAGTTTGAAT TGGCCTTGGT TGGCTCGCCA ATTGTCCATA CCCAATTGAT CATTATGCCG
TTTTTGACGA CTGAATTGGT CGTGATTGTC AGCCCTGATG ACCCATGGGC ACGCTTAAAA
CAAATTAACA TCGAGGCCTT ACACGGGCGA CGCATGCTCT TGCGCGAGGA AGGCTCCGCC
TTGCAAGCCA GCGTCAGCGA ATTGCTCAAT GCTCAGCAAA TTCGCCCTAA ACAACCAATT
GTGCTAGGAA ATTTAGAGGC GATCAAGCGT TCGGTTGAGG TTGGCTTGGG CATCGCCTTA
GTGCCAGCTA TGGCCGTGCG CCGCGAAGTG GCGGCTGGGC GTTTGCGTCA AATTCATTTA
GCCAATGTGC CAACCCGCCG CGTTTATAAC GTCGTGCATC ATCGCGACCG CCATATTACC
AACGCCGCTC AACTATTCCT TGACCTTTTG CGCAAACCCT TGGGTCCTGA TACTAACGAA
TGA
 
Protein sequence
MLDLQKLRMF VAAAQSRNFT RAAEQLDLTQ PTVSQQIQTL ERELGVSLFE RLSRGIELTA 
AGRALLPHAE QMIALERIAE QAVRAAAGQS ERTLLLGVGN TLATYALPDL LQRFNWEHPA
FVVHIGTGNT EQLLAQVISG EFELALVGSP IVHTQLIIMP FLTTELVVIV SPDDPWARLK
QINIEALHGR RMLLREEGSA LQASVSELLN AQQIRPKQPI VLGNLEAIKR SVEVGLGIAL
VPAMAVRREV AAGRLRQIHL ANVPTRRVYN VVHHRDRHIT NAAQLFLDLL RKPLGPDTNE