Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0396 |
Symbol | |
ID | 5731964 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 464627 |
End bp | 465529 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641277519 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001543175 |
Protein GI | 159896928 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.21777 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGGATT TACAAAAATT ACGGATGTTT GTGGCAGCGG CGCAAAGTCG CAATTTTACC CGCGCTGCCG AGCAACTTGA CCTAACTCAA CCAACCGTGA GCCAGCAAAT TCAAACGCTT GAGCGCGAAT TAGGCGTTAG TTTGTTTGAG CGGCTAAGTC GTGGAATTGA GCTAACAGCG GCTGGGCGGG CGCTCTTGCC GCATGCCGAG CAAATGATCG CCCTCGAACG GATTGCCGAG CAAGCAGTGC GGGCTGCGGC TGGTCAAAGT GAACGTACCT TGCTCTTGGG CGTTGGCAAT ACCTTGGCAA CCTATGCCCT GCCCGATTTG CTGCAACGCT TCAACTGGGA ACACCCTGCG TTTGTGGTGC ATATTGGCAC AGGCAACACG GAACAATTGC TGGCTCAAGT CATTTCGGGC GAGTTTGAAT TGGCCTTGGT TGGCTCGCCA ATTGTCCATA CCCAATTGAT CATTATGCCG TTTTTGACGA CTGAATTGGT CGTGATTGTC AGCCCTGATG ACCCATGGGC ACGCTTAAAA CAAATTAACA TCGAGGCCTT ACACGGGCGA CGCATGCTCT TGCGCGAGGA AGGCTCCGCC TTGCAAGCCA GCGTCAGCGA ATTGCTCAAT GCTCAGCAAA TTCGCCCTAA ACAACCAATT GTGCTAGGAA ATTTAGAGGC GATCAAGCGT TCGGTTGAGG TTGGCTTGGG CATCGCCTTA GTGCCAGCTA TGGCCGTGCG CCGCGAAGTG GCGGCTGGGC GTTTGCGTCA AATTCATTTA GCCAATGTGC CAACCCGCCG CGTTTATAAC GTCGTGCATC ATCGCGACCG CCATATTACC AACGCCGCTC AACTATTCCT TGACCTTTTG CGCAAACCCT TGGGTCCTGA TACTAACGAA TGA
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Protein sequence | MLDLQKLRMF VAAAQSRNFT RAAEQLDLTQ PTVSQQIQTL ERELGVSLFE RLSRGIELTA AGRALLPHAE QMIALERIAE QAVRAAAGQS ERTLLLGVGN TLATYALPDL LQRFNWEHPA FVVHIGTGNT EQLLAQVISG EFELALVGSP IVHTQLIIMP FLTTELVVIV SPDDPWARLK QINIEALHGR RMLLREEGSA LQASVSELLN AQQIRPKQPI VLGNLEAIKR SVEVGLGIAL VPAMAVRREV AAGRLRQIHL ANVPTRRVYN VVHHRDRHIT NAAQLFLDLL RKPLGPDTNE
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