Gene Haur_0369 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0369 
Symbol 
ID5732220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp441790 
End bp442740 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content54% 
IMG OID641277492 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_001543148 
Protein GI159896901 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones9 
Plasmid unclonability p-value0.137804 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACGC TATTGCGGCA ATCTGCGGGG CGCTTGCTCA GTGGGCTAAT GGTCTTATGG 
ATGGTCAGCA TGCTGGCATT TCTGATCATC CATATGGCTC CAGGTGATCC AGCGCGAATG 
TTGTTGAGCG CCAGCGGCCT TGATGCACCA CCCGCCGAAG CTGTTGCAGC CAAACGACGT 
GAGCTAGGGC TTGATCGTCC GCTGCTCAGC CAATATGTCA GCTGGCTTGG CGCGGTGGTG 
CAGGGCGATT TTGGGGTCAG CTATCGTTCG GGCAAACCAG TTTGGTCGAT GTATCGCGAA 
CGGTTGCCCG CCACCTTACT GATGGCGGGC TTGGTGCTAA CAGTTTCGCT GAGCATTGCC 
ATTCCTTTGG GATTGATCAG CGCGATCAAG CGCCATAGTT TGTTGGATCA TGCGGCGCAA 
TTTTTGGCCG TGATTGGCGC GGCAATTCCT GGCTTTTGGA TTGCGCTGGT GTTGATTTTG 
GTGTTTGCGG CCAAATTGCG TTGGTTACCA GCCCTCGGCA GCGCCACATT TAAAGGCATG 
CTGCTGCCAG CCATCGTTTT AGCCTTGCCG AATATAGCGC TAACCTCACG TTTGGTACGC 
GCAACCACCC TCGACGTGCT AAATCAACAG TATATCGTGA CGGCTCGAGC CAAAGGGCGC 
TCCGAATATG GTTTGCTCTT TGGGCATGCG CTTCCCAACA TTGCGGCCAG TTTGATCACC 
CCAATCAGCC TAGAATTGGC CTTTTTGCTA ACTGGCACGG TAATTATTGA AACAGTATTT 
GCCTATCCTG GGGTTGGGCG GATGGCGGTT GAGGCAGCCT TGGTCGGCGA TATGCCAGTT 
TTGGGCTTGT CAGTCTTGAT CGCAGGGGGA ATTTATGTTA TCGCTAACTG GTGCGCTGAC 
CTCGGCATGG CAGCGCTTGA CCCACGGCTC CGCCAAAACG CCAATAATTG A
 
Protein sequence
MSTLLRQSAG RLLSGLMVLW MVSMLAFLII HMAPGDPARM LLSASGLDAP PAEAVAAKRR 
ELGLDRPLLS QYVSWLGAVV QGDFGVSYRS GKPVWSMYRE RLPATLLMAG LVLTVSLSIA 
IPLGLISAIK RHSLLDHAAQ FLAVIGAAIP GFWIALVLIL VFAAKLRWLP ALGSATFKGM 
LLPAIVLALP NIALTSRLVR ATTLDVLNQQ YIVTARAKGR SEYGLLFGHA LPNIAASLIT 
PISLELAFLL TGTVIIETVF AYPGVGRMAV EAALVGDMPV LGLSVLIAGG IYVIANWCAD 
LGMAALDPRL RQNANN