| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0332 |
|---|
| Symbol | |
|---|
| ID | 5732242 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 396063 |
|---|
| End bp | 397805 |
|---|
| Gene Length | 1743 bp |
|---|
| Protein Length | 580 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 641277456 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543112 |
|---|
| Protein GI | 159896865 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGTTCTTC GAAGGATGAT GTTTGTTTTG CTGGTTATTT TTAGCTTGAG CACTGTTTCG
GCAACGTCGC TGGAAACTCC CTCTGCTGAG CCACTCGACG CAGCAAGCCC CGCTAGCCCA
GCCGCCACCA ATGCCTACAC CATGCGAGCT GGATTCCCTG CAACCAAGCC GAATGGTTCA
TATTTTTCAT CACCAACCGT CGTTGATCTA TTTAAAGATG GTTCGCCCGA GATTCTTTCA
GCAGATGCAA CTGGTTGTAT TTGGGGTTAC AACATTTATG GTCAATTGTT GCCTGGCTTT
CCCTGGATGA CTGGCGGTGC GTGTGCCAAT ACCCCGCGGA TCAATGGTTC GTTGGTGGTC
GCTGACATTA ACGAAGATGG CTTATTGGAA ATTGTGGTTG GCACACGCGG CAAAGGCACA
AGCGTTGGTC AGCGCGGCAA GGTCATTGTT TATCAACGCA ATGGAGCCAT TTTGAGCGGT
TGGCCCAAAG AAATGGAATG GGCCTACATC ACCAACGGCA ACTTCCCCGA GGTGGTGCAT
GTCGCTGTTG ACGATATTAT TGGTGATAGC AAACTTGAGG TGATTGCGAC TACCACGAAT
GAGGCGGGTA GTAATACTGA TTATGCACCC AATGTGCATG CGTGGTATTA CACGGGGAAT
GTCGTTACTG GCTACCCCAA AAGCTCCGAT AAAGGCTCGG GCATTTGGGG CCACCCCGCC
TTGGCCGACC TCGACAATAA CGGCAAATCG GAGATCTTCG TTGGCCGCGA TGAACTCTAT
TTCTATCGCT ATAAAAACGA TGGAACCCAA TATGCAGGCT GGCCAATTCA GACCTATACC
CATGTCAACC AAACGACTTG GAATGTTCAC GATTATATTG AGTTTACCCG CTCTGGCCCA
GCTATCGCCG ATTTAGATAA TGATGGCAGT TACGAGGTGA TTGCAGCAGG TAAAGTGCGG
ACTCCAGACG GCGATCCGCA TAACAACTAC GACCCGCAAA GTGCTAGTGC GGTTTTCGTA
ACTGAGCCAG ATGGTACTCG CCGCCCTGGC TGGACTGATG CCAAACGCGC TGGCGCACCG
TTGGATGTCA ACTTTACCCC CAATAATCCG ATTGTTGTCG CCGATTTGGA TGGCAATGGT
GAAAAGGAAT TTGTAGTTAC CTTCGATGAT GGTACAATTC GCGCCTATCG CGAAAACGGC
ACGCAAATCT GGTCGTATTT CTATGCTGAG GAACCAGTCC AAGGTGCGCC AACCCGCAAA
GTATTTGGTA GCGAAGTCGT CATTGCCGAT GTTACGGGTG ACCGCAAGCT AGATATTGTC
TTTGGTACGT ATTCATTCGA CCGACTTTAT GCGGGGATTG TCGGGTTGTA TGCCCTCGAT
GCCCGCAATG GAGCCTTGCA TTCGGGCTTT CCACTGAGTT TGCCCAATGA AGGCACGGCT
AGCGATAACA GTGCTGGCTC GCAGAAAGGG ATTCAAGCCG CCCCAACTAT CTCCGATATC
GATAATAACT GCTATGTCGA AATTTTGGCC CACAGTCGGG CGGGCAATAT TTATGTTTGG
GAAACCCTAG GCCGCAATTT GCCTGAATTA ATGCCTTGGC CGATGAGCCG CCAGAACTTA
CAGCGCACTG CGTGGGTGCA AAATCCACCT GAACCACGCC AACACGTATT TGCCCCCGAG
CAAATTCAAG GCGGTGATTT CAATGTCTAT TTGCCAATGA CCCGCATGGG TTGCGATTTC
TAG
|
|---|
| Protein sequence | MVLRRMMFVL LVIFSLSTVS ATSLETPSAE PLDAASPASP AATNAYTMRA GFPATKPNGS
YFSSPTVVDL FKDGSPEILS ADATGCIWGY NIYGQLLPGF PWMTGGACAN TPRINGSLVV
ADINEDGLLE IVVGTRGKGT SVGQRGKVIV YQRNGAILSG WPKEMEWAYI TNGNFPEVVH
VAVDDIIGDS KLEVIATTTN EAGSNTDYAP NVHAWYYTGN VVTGYPKSSD KGSGIWGHPA
LADLDNNGKS EIFVGRDELY FYRYKNDGTQ YAGWPIQTYT HVNQTTWNVH DYIEFTRSGP
AIADLDNDGS YEVIAAGKVR TPDGDPHNNY DPQSASAVFV TEPDGTRRPG WTDAKRAGAP
LDVNFTPNNP IVVADLDGNG EKEFVVTFDD GTIRAYRENG TQIWSYFYAE EPVQGAPTRK
VFGSEVVIAD VTGDRKLDIV FGTYSFDRLY AGIVGLYALD ARNGALHSGF PLSLPNEGTA
SDNSAGSQKG IQAAPTISDI DNNCYVEILA HSRAGNIYVW ETLGRNLPEL MPWPMSRQNL
QRTAWVQNPP EPRQHVFAPE QIQGGDFNVY LPMTRMGCDF
|
|---|
| |