| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0305 |
|---|
| Symbol | |
|---|
| ID | 5732200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 363943 |
|---|
| End bp | 366207 |
|---|
| Gene Length | 2265 bp |
|---|
| Protein Length | 754 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 641277429 |
|---|
| Product | GAF sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001543085 |
|---|
| Protein GI | 159896838 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG5002] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC GATCACGGCA ACGCGGCCAT CAACAGCTCC AAACTATGCG CAGCAAACGG
ATTCAGGCGC GACTGCTAGC GCTCTCACGG GTCATGAACG ATATTATGAA TGTTGATGAT
CCAGCGCGAT TGATCACTGC TGCCAGTGCC AAATTGCGCC AGGTTTTAGC TGTTGATGCC
ATTGCAGTGT GGTTTTATAG TCCTACTTCA CATCGTTACC TACTAAGCCA CTTCAATAAT
GCCAACCACG AAGATTTTAG TGCAGATGAT CGCGAGGCCT TAAGTGCTTT GCAAGTGCGC
AGCGGCGAGG CGTTGGCTGG GCGTGTGGTC AGTGAAGGCC ATGCGATCAG CGCCCGCAAC
GCCGACGAAT ATCGCAGCAT GTTTGGCGCA TTGGGTCGCC GCCGCGAGGC CTTATTCAAT
CGCTGGCGAG CGCTCCTGCC AATTTCATTT CAAGTAACCG GTTTCACGCT GGGCGGCAAT
GGGCGACCCA GCGGCGTGAT TGAGCTTTTC AGTAGCAAGC CCAGCATCAA TGCTAACTCG
GCTGCTTGGC TACAACCAAC CCTTGATCAG CTTGGTTCGT TGTTGCAGTT AGTGCGTCAA
CAGGCCGATG CCCGTAGCCA GCGCCGCCGT TTGGCCGCCC TCGATGCCGT CGTTACCGCG
ATTAGCACCT CTTCCGACTT GCCCGACCTC TTAAATGTGG CGCTGTTGGT GGTGATTGAG
GTAGTCAGCG CCAATGGTGG GGCAATTTGT TTGGCCTCGC CTGGTGGCCG TAGCATGACT
TTAGCCGCGC AACATCAACT CCCGCAACGC GAGGCTTTGC TCCTTGGTTC GAGCCAAGCC
AACAGCGTGT TGGAAGATGT CGTTTACTAC GGCCAGCCAA CCTTGCGACC CGTGATCAGC
ACCAGCGATC TTGGCGAGGA TATTATGGGT CGCGCTGCCA TGCCTTTGCT GGCTGGGGGC
ACAATCGTCG GGGTTTTGGT GTTATATGGC AATTACCAAA CGCTCTCGAA TAATATCGAT
TGGCCTTCGC TGGTTTCGAT GGGTTCGCAA ATTGGCATCG CGATTGCCAA TACCCGTTTA
TACGAAGAAA GCCAACGCGA ACGCCAACGG CTGGGCACGG TGATCGAATC GATCGCTGAT
GGCGTGGCAA TTTGTAATGG CGTTGGCGAA TTAATTCTGG CCAACGAAAC CGCAGCGGGC
TTGGTGGAAA TTTCAATTCT GCCCACCTTA GCCACCAGCA GCGAATCGGG CGCACGCTAC
CTTGATGGCA CGTTTGTCGA AGCTGATATG CTGCCATTTG CCCGCGCTTT GGCTGGTGAA
GTGTTCCGCG ATTATCGTTT AATTGTGCCA GGCAGCCAAG ACCAAGATGT GGTGCTGAGC
TTCAGCGGTG CACCGTTGCG CCGTTCAGTA TTAATTGATA GTACTGAAAC ATCGTTTGAT
GGTGCAGTAA TCGTGTTTCG CGATATTACC GAGCAACGCC GTTTGGAAGA GGCCAAGGAT
GAGTTTTTAG CGGTTGCTGC TCACGAACTG CGCTCACCAC TGGCGGCAAT CAAAGGCTAC
AGCGATTTGT TGCTGCGCCG CGAGTTGAAG CAAGCCAGCG AAGGCCGTGA TTTGCGCGGC
TTTATCACCT TGAGCCAGCA AGTCAATATT ATGGTGCAGT TGGTCGATAA TTTGCTTGAT
GTTTCACGAA TTGATGCCGA GCGCTATACG ATTCAGCTTG ATGCGGTTGA TTTGGGGATC
TTGCTTGATT CAGTTGTGAC CCATGCTCGC CAAACCGCCA ACAATCATAC CTTACATTTT
GAGCAACTCA ACCAGAGCGT CGTCTATGGC GATTCGCTAA AATTGCGCCA AGTTGCTACC
AATTTTCTGA CTAATGCAAT TCGCTATAGC CCGCAACAAA CCAACATTTG GGTGCAAGTG
TTTAGCGATG AACAATTTGG CTATGTCCAA GTTGATGATC AAGGGCCAGG CATTCCACAA
GGCCAACGCG AACGTTTGTT TGAACGCTAC TACAGAGTGC CGGGGATTCG CCGTACCGGA
TCGAGCACCG AAGGTTTGGG TTTAGGCTTG TATTTATGTC GCGAAATTAT TACACTGCAC
AATGGGCGAA TTTGGGTTGA TAGCGCTCCG AGCGGCGGCG CACGCTTTTG CATCGCCATT
CCGCGCTTTA TCCCTGAAAA ACATGAAACC AACACAACCC AAACCACCCT CGATCTCGAT
GCCTTTTTAT TCTCGCCCCA ACCAGGCCGG AGGAATGATG AATAG
|
|---|
| Protein sequence | MTERSRQRGH QQLQTMRSKR IQARLLALSR VMNDIMNVDD PARLITAASA KLRQVLAVDA
IAVWFYSPTS HRYLLSHFNN ANHEDFSADD REALSALQVR SGEALAGRVV SEGHAISARN
ADEYRSMFGA LGRRREALFN RWRALLPISF QVTGFTLGGN GRPSGVIELF SSKPSINANS
AAWLQPTLDQ LGSLLQLVRQ QADARSQRRR LAALDAVVTA ISTSSDLPDL LNVALLVVIE
VVSANGGAIC LASPGGRSMT LAAQHQLPQR EALLLGSSQA NSVLEDVVYY GQPTLRPVIS
TSDLGEDIMG RAAMPLLAGG TIVGVLVLYG NYQTLSNNID WPSLVSMGSQ IGIAIANTRL
YEESQRERQR LGTVIESIAD GVAICNGVGE LILANETAAG LVEISILPTL ATSSESGARY
LDGTFVEADM LPFARALAGE VFRDYRLIVP GSQDQDVVLS FSGAPLRRSV LIDSTETSFD
GAVIVFRDIT EQRRLEEAKD EFLAVAAHEL RSPLAAIKGY SDLLLRRELK QASEGRDLRG
FITLSQQVNI MVQLVDNLLD VSRIDAERYT IQLDAVDLGI LLDSVVTHAR QTANNHTLHF
EQLNQSVVYG DSLKLRQVAT NFLTNAIRYS PQQTNIWVQV FSDEQFGYVQ VDDQGPGIPQ
GQRERLFERY YRVPGIRRTG SSTEGLGLGL YLCREIITLH NGRIWVDSAP SGGARFCIAI
PRFIPEKHET NTTQTTLDLD AFLFSPQPGR RNDE
|
|---|
| |