Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0297 |
Symbol | |
ID | 5732192 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 354584 |
End bp | 355606 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641277421 |
Product | LacI family transcription regulator |
Protein accession | YP_001543077 |
Protein GI | 159896830 |
COG category | [K] Transcription |
COG ID | [COG1609] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAACAAC TCACGATTCG CCAAATAGCC CAACTTGCCA ATGTTTCACG CTCGACCGTT TCGCGGGTAA TCAACAATCA TCCCAGCGTG CGGCCCGAAG TGCGACAACG GGTGTTGGAA GTTATTCGCG AACAAGACTA TGTTCCGCAG GCAGCCGCTC GTAGTCTGGC AAGCCGCCGA ACCAATGTGG TGACCCTGTT GATCCCACGC AGCTCGGCAA TTATCTTCAC TGACCCATTC TTCCCATTAA TCATCCAAGG AATTACCGAA ACCTGTTCTG AGCGGGATTA TTCGGTGATG CTTTCGATGG TGACTGGCAC CCAAGAACGG GATTTCTATC AGCGGGTATT ACGCAGTCGG ATGACCGACG GTCTGTTGAT GCTTTCGAGC GATATTGATG ACCCAGTGTT ACCCTTGCTG ATTAACGACC AAATGCCGTT GGTCTTAATC GGCGAACACC CGTATATGCA GCCAATGTAT ACCGTTGACG TGGCAAATCG GGCCGGGGCA GTGCTAGCAG TCAGCCATTT ATTGCAACTT GGCCATCGAC GGATTGGGGC GATTACAGGC CTACTGCAGA TGAAAACCGC CATTGATCGC CGTGACGGCT ATAAGCAAGC GTTATTGCAA GCAGGCGTTG CCATCGAGCA TTCGTTGATG ATCGAGGGCG AATTTACCCA AGAGGGTGGC TATGCTGCAA TGCGCCAATT GCTCAGCCTT GAACAGCGAC CAAGCGCTGT CTTTGTGGCC AGCGACACCA TGGCATTAGG AGCCTTACGG GCTATTTACG AGGCCGGGTT ACATGCTCCC CACGATATTT CGCTGATCGG CTTTGATGAT GTGCCAGGCG CGGCCTATAC AACCCCCGCC CTGACGACGA TTCACCAACC AATTCAGAAG CTTGGTAGTA CCGCCGCCAC GATGTTGCTT GACCATCTCG AAGGGCGACC ACCGCTCCAG CAACACATCC GTCTCTCACC TTCGTTAGTC TTACGCCAAT CGTGCGGGCC ACGGGTCGCC TAA
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Protein sequence | MEQLTIRQIA QLANVSRSTV SRVINNHPSV RPEVRQRVLE VIREQDYVPQ AAARSLASRR TNVVTLLIPR SSAIIFTDPF FPLIIQGITE TCSERDYSVM LSMVTGTQER DFYQRVLRSR MTDGLLMLSS DIDDPVLPLL INDQMPLVLI GEHPYMQPMY TVDVANRAGA VLAVSHLLQL GHRRIGAITG LLQMKTAIDR RDGYKQALLQ AGVAIEHSLM IEGEFTQEGG YAAMRQLLSL EQRPSAVFVA SDTMALGALR AIYEAGLHAP HDISLIGFDD VPGAAYTTPA LTTIHQPIQK LGSTAATMLL DHLEGRPPLQ QHIRLSPSLV LRQSCGPRVA
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