Gene Haur_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0297 
Symbol 
ID5732192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp354584 
End bp355606 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content54% 
IMG OID641277421 
ProductLacI family transcription regulator 
Protein accessionYP_001543077 
Protein GI159896830 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGAACAAC TCACGATTCG CCAAATAGCC CAACTTGCCA ATGTTTCACG CTCGACCGTT 
TCGCGGGTAA TCAACAATCA TCCCAGCGTG CGGCCCGAAG TGCGACAACG GGTGTTGGAA
GTTATTCGCG AACAAGACTA TGTTCCGCAG GCAGCCGCTC GTAGTCTGGC AAGCCGCCGA
ACCAATGTGG TGACCCTGTT GATCCCACGC AGCTCGGCAA TTATCTTCAC TGACCCATTC
TTCCCATTAA TCATCCAAGG AATTACCGAA ACCTGTTCTG AGCGGGATTA TTCGGTGATG
CTTTCGATGG TGACTGGCAC CCAAGAACGG GATTTCTATC AGCGGGTATT ACGCAGTCGG
ATGACCGACG GTCTGTTGAT GCTTTCGAGC GATATTGATG ACCCAGTGTT ACCCTTGCTG
ATTAACGACC AAATGCCGTT GGTCTTAATC GGCGAACACC CGTATATGCA GCCAATGTAT
ACCGTTGACG TGGCAAATCG GGCCGGGGCA GTGCTAGCAG TCAGCCATTT ATTGCAACTT
GGCCATCGAC GGATTGGGGC GATTACAGGC CTACTGCAGA TGAAAACCGC CATTGATCGC
CGTGACGGCT ATAAGCAAGC GTTATTGCAA GCAGGCGTTG CCATCGAGCA TTCGTTGATG
ATCGAGGGCG AATTTACCCA AGAGGGTGGC TATGCTGCAA TGCGCCAATT GCTCAGCCTT
GAACAGCGAC CAAGCGCTGT CTTTGTGGCC AGCGACACCA TGGCATTAGG AGCCTTACGG
GCTATTTACG AGGCCGGGTT ACATGCTCCC CACGATATTT CGCTGATCGG CTTTGATGAT
GTGCCAGGCG CGGCCTATAC AACCCCCGCC CTGACGACGA TTCACCAACC AATTCAGAAG
CTTGGTAGTA CCGCCGCCAC GATGTTGCTT GACCATCTCG AAGGGCGACC ACCGCTCCAG
CAACACATCC GTCTCTCACC TTCGTTAGTC TTACGCCAAT CGTGCGGGCC ACGGGTCGCC
TAA
 
Protein sequence
MEQLTIRQIA QLANVSRSTV SRVINNHPSV RPEVRQRVLE VIREQDYVPQ AAARSLASRR 
TNVVTLLIPR SSAIIFTDPF FPLIIQGITE TCSERDYSVM LSMVTGTQER DFYQRVLRSR
MTDGLLMLSS DIDDPVLPLL INDQMPLVLI GEHPYMQPMY TVDVANRAGA VLAVSHLLQL
GHRRIGAITG LLQMKTAIDR RDGYKQALLQ AGVAIEHSLM IEGEFTQEGG YAAMRQLLSL
EQRPSAVFVA SDTMALGALR AIYEAGLHAP HDISLIGFDD VPGAAYTTPA LTTIHQPIQK
LGSTAATMLL DHLEGRPPLQ QHIRLSPSLV LRQSCGPRVA