| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0295 |
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| Symbol | |
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| ID | 5732190 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 348845 |
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| End bp | 351409 |
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| Gene Length | 2565 bp |
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| Protein Length | 854 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641277419 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001543075 |
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| Protein GI | 159896828 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG5297] Cellobiohydrolase A (1,4-beta-cellobiosidase A) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.271703 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGGC ACTATTACGC CCGAGGGGCG ATGCTGTTAG CGCTGCTAAC GATGATTGGT
GGCCTGTTGA CCACCCAGAA TGCCAAGCCA ACCGCCGCCG CTGCCAGTTG TGTGGTCACC
TATCGCATTC CCAACGATTG GGGCAGTGGC TTCCTCGGCG ATGTTAATAT TCAAAATAAT
GGTGCAGCCA TCAGTAGCTG GACGGTTGGC TGGAGTTTCG CTGGCAATCA GCAAATTACC
AACCTCTGGA GTGGGATTGT AACCCAAACT GGCAACCAAG TAAGCGTGCG TAACGCAGGC
TGGAACGGCA CGATCAGCAG TGGTGGTGCA GTCAACTTTG GCTTCCAAGG AACCTACAGC
GGTGCTAATG CAATCCCAAC GGTGTTTACA TTAAATGGTG TGGTTTGTGG TGAAACGAAT
CCGAACCCAA CCGCAACCAC TCCACCAACC GCAACCACCC GCCCAACCAA CACGGTAGTT
GTACCAACCA ATACACCACG GGCAACTAAC ACAACCGTAC CACCAACTAA TACGGCTGTG
CCACCAACTA GCACAACTCG CCCAACTAAT ACGGCTGTGC CGCCAACCGC GACCAACGGC
CCAACCAGCA CGCCACGGCC CACCAATACC CCAACGGTTG TGCCACCAAC CAGCACCCCA
ACCCAACCAG GCGATGATAC CTACGATCAA CGCTTCTTGG AAATGTATGC TGAGTTGAAG
AACCCAGCTA ATGGCTATTT CAGCCCTGAA GGTGTGCCCT ACCACTCAAT CGAAACCTTG
ATTGTCGAAG CTCCGGATTA TGGCCACGAA ACCACTTCCG AAGCCTATAG CTATTGGTTG
TGGCTCGAAG CGATGTACGG TGAGGCAACT GGCAATTGGC AACCATTGGC CGATGCTTGG
CGCAACATGG AAATGTACAT CATTCCAACC AGCCAAGATC AACCAAGCAG TGGTTCGTAT
AATGCCAATA GCCCAGCCAC CTATGCTGGC GAATGGGAAT TACCCAGCCA ATATCCATCA
CAATTGCAAA CCAACGTTTC AGTTGGCCAA GACCCAATCG CCGCTGAATT GCGCTCGGCT
TATGGCACCA GCGATGTCTA TGGCATGCAC TGGTTGCTCG ACGTTGATAA CTGGTATGGC
TATGGCCGCC GTGGCGATGG CACCAGCAAA CCATCATATA TCAACACCTT CCAACGTGGC
GCTCAAGAAT CAGTTTGGGA AACCGTGCCC CATCCATCGT GGGAAAGTTT CAACGATGGC
GGCCCCTTCG GCTTCTTGAA CTTGTTCACT GGCGATGCGA GCTATGCCCG CCAATGGCGC
TACACCAACG CCCCCGATGC TGATGCCCGT GCTGTCCAAG CGATTTACTG GGCCAAAGTA
TGGGCCGACG AACAAGGTGG CTCACCAATC GTCAATGGTT TGGTAACCAA GGCCGCCAAG
ATGGGCGACT ACTTGCGCTA CGCCTTCTTC GATAAGTACT TCAAGCAAAT TGGCTGTACT
TCAACTTCAT GTCCAGCTGG TTCAGGCTAC AGCAGCGCTC ACTACCTATT GTCGTGGTAC
TACGCTTGGG GTGGTTCGAT TGGCAATGGT GGTGGCTGGG CATGGCGCAT CGGCAGCAGC
CACAATCACT TTGGCTACCA AAACCCAATG GCAGCCTGGA TTTTGGGCAG CCAACCAGCC
TTCAAGCCAG CTTCAACCAA CGGCGCTCGC GACTGGAACA CCAGCTTGAC CCGCCAAATC
GAGTTCTATA CTTGGTTGCA ATCAAGCGAA GGTGCCATCG CTGGTGGTGC TACCAATAGC
TGGAATGGCC GCTACGAAGC AGCCCCAGCC GGAACCAGCA CCTTCTACAA TATGGCCTAC
GACGAAAAAC CAGTCTATCA CGATCCCGCT AGCAACACCT GGTTTGGTTT CCAAGCTTGG
TCGATGGAAC GGGTCGCTGA ATATTACTAC GCTTCAGGCG ATGTCAAAGC CAAGAACGTG
CTCGATAAGT GGGTAACCTG GGCTTTGGCC AACACCACCT TGACCAGCAA TGGCAGCTAT
GAAATTCCAT CAACCTTGGC TTGGAGCGGC CAACCAGCTA CCTGGAACGC CAGCAATCCA
GCCGCTAACA CCAACTTGCA CGTCACGGTC GTCGATAAGA CCCAAGACGT TGGTGTTGCC
GCCGCCTATG CCAAAACCTT GATGTACTAC AGCGCTGCAA CCAAGCGCTA TGGCACTCAA
CATGTCGCTT CACAAACCAT GGCCAAAGAA TTGATCGACC GTATGTGGTC AGAATACCGC
GATGATAAGG GTGTTGCGAA CCCCGAAACC CGCCGCGATT ACAACCGCTT CGATGATCCA
GTGTCAGTGC CAAACGGCTG GACTGGCACC ATGGCCAATG GTGATCCAAT CAACAATTCA
TCAACCTTCT TGAGCATTCG CACCAAGTAC GAAGATGATC CAGCCTTCCC AGCCGTGCAA
GCCTACCTAA ACGGTGGCCC TGCTCCAACC TTCACCTACC ACCGCTTCTG GGCCCAGGCC
GATATCGCAA TGGCTTACGC CGAATACGAT CGCTTGTTCC AGTAA
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| Protein sequence | MSRHYYARGA MLLALLTMIG GLLTTQNAKP TAAAASCVVT YRIPNDWGSG FLGDVNIQNN
GAAISSWTVG WSFAGNQQIT NLWSGIVTQT GNQVSVRNAG WNGTISSGGA VNFGFQGTYS
GANAIPTVFT LNGVVCGETN PNPTATTPPT ATTRPTNTVV VPTNTPRATN TTVPPTNTAV
PPTSTTRPTN TAVPPTATNG PTSTPRPTNT PTVVPPTSTP TQPGDDTYDQ RFLEMYAELK
NPANGYFSPE GVPYHSIETL IVEAPDYGHE TTSEAYSYWL WLEAMYGEAT GNWQPLADAW
RNMEMYIIPT SQDQPSSGSY NANSPATYAG EWELPSQYPS QLQTNVSVGQ DPIAAELRSA
YGTSDVYGMH WLLDVDNWYG YGRRGDGTSK PSYINTFQRG AQESVWETVP HPSWESFNDG
GPFGFLNLFT GDASYARQWR YTNAPDADAR AVQAIYWAKV WADEQGGSPI VNGLVTKAAK
MGDYLRYAFF DKYFKQIGCT STSCPAGSGY SSAHYLLSWY YAWGGSIGNG GGWAWRIGSS
HNHFGYQNPM AAWILGSQPA FKPASTNGAR DWNTSLTRQI EFYTWLQSSE GAIAGGATNS
WNGRYEAAPA GTSTFYNMAY DEKPVYHDPA SNTWFGFQAW SMERVAEYYY ASGDVKAKNV
LDKWVTWALA NTTLTSNGSY EIPSTLAWSG QPATWNASNP AANTNLHVTV VDKTQDVGVA
AAYAKTLMYY SAATKRYGTQ HVASQTMAKE LIDRMWSEYR DDKGVANPET RRDYNRFDDP
VSVPNGWTGT MANGDPINNS STFLSIRTKY EDDPAFPAVQ AYLNGGPAPT FTYHRFWAQA
DIAMAYAEYD RLFQ
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