| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0286 |
|---|
| Symbol | |
|---|
| ID | 5732181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 334675 |
|---|
| End bp | 335556 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641277410 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001543066 |
|---|
| Protein GI | 159896819 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG5006] Predicted permease, DMT superfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00960763 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTTAA CGGCGATTGC TCCAATTTTG TGGGGCACAA CCTATGTCAT TACCACCGAG
TGGCTGCCAG CCAACCGTCC GTTGTTGGTC GGCGTAATGC GGGCCTTGCC GATTGGCTTG
ATCTTTTTGG CCTTGGGGCG GCAATTGCCC AAAGGCATTT GGTGGTGGCG CTCGTTGGTG
CTGGGCGCGT TGAATATTGG CTTCTTCTTC CCCTTATTAT TTATTGCCGC CTACCGCTTG
CCTGGTGGTA TCGCCGCTAC GTTGGGCGCA TTGCAACCAT TTATCGTGGC GTTTTGGGGC
TGGGTGGTGC TCAAAGAGCG AGTCACTTCG CGCTTGCTGT TGATGGCGGG TTTAGGTGTG
CTTGGGGTTG GCATGATGCT GCTCAATCCA CAGGCTCAAC TTGATGCTTG GGGCATGCTG
GCAGCTTTTG GTGGCGCGAT GCTCTATGGC GTGGGCATTA CATTAAACAA ACATTGGGGA
CGACCAGTGC CCTTATTGAC CTATACCGCT TGGCAATTGG TGGTTGGCGG CCTGATGATT
GTGCCAATTG CCCTGTTGAT TGAAGGCCTA CCGCCCGCCT TTACAACCAG CAATTGGCTG
GGTTTTGGCT TGATTGGCCT CGTCAACACG GGCGTGGCTT ATCTCTTTTG GTTTCGCGGC
ATCGAGCGCC TAAAAACATC CACCATGTCG TTTTTGATTT TGCTTAGCCC AGTTTCAGCG
ACCGTGCTAG GCTGGCTGGT ACTCGATCAA CGCCTGAGTT GGTTGCAAAT GCTGGGCGCT
TTGGTGGTAC TGGCTAGCAT CGTATTAAGC CAACTGCCGA GCCGCCAGCC CACCCCGCGT
TTGCAGGTGC AACCAGCAGC TGACTCTGCC CTCACCCCCT AG
|
|---|
| Protein sequence | MLLTAIAPIL WGTTYVITTE WLPANRPLLV GVMRALPIGL IFLALGRQLP KGIWWWRSLV
LGALNIGFFF PLLFIAAYRL PGGIAATLGA LQPFIVAFWG WVVLKERVTS RLLLMAGLGV
LGVGMMLLNP QAQLDAWGML AAFGGAMLYG VGITLNKHWG RPVPLLTYTA WQLVVGGLMI
VPIALLIEGL PPAFTTSNWL GFGLIGLVNT GVAYLFWFRG IERLKTSTMS FLILLSPVSA
TVLGWLVLDQ RLSWLQMLGA LVVLASIVLS QLPSRQPTPR LQVQPAADSA LTP
|
|---|
| |