Gene Haur_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0272 
Symbol 
ID5732167 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp320711 
End bp321139 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content49% 
IMG OID641277396 
Producthypothetical protein 
Protein accessionYP_001543052 
Protein GI159896805 
COG category[S] Function unknown 
COG ID[COG5478] Predicted small integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTACAGCG TCAAAACGAA GTCACGGTTT ACCCAAGTCT CCAAGTGGAC TGCCCATATC 
ACGGGACGAC CAAGGACGTT TGGTCTTGCG GTCGGGGTGA TCTTCCTGTG GATGATTAGT
GGACCACTGT TTGGCTGGAG CGATACATGG CAGTTGGTGA TTAATACGAG CACAACGATT
ATTACCTTTC TTATGGTCTT TCTGATTCAA AATACACAGA CGCGCGATTC AGAAGCCATT
CAAATCAAGC TTGATGAATT GATCCGTGCA ACGCAGGGTG CTCATAATGC GCTTCTTGAT
CTGGAGGAGT TGGAAGAGGA CGAGTTAGAC CAGATTCGGG CGACATATCA ACGATTGTCG
GAACGAGCTC GCGAGGCCAT CCGTCATGGA TTGGTCGATA CAGATAACCC CGAACCCGAA
GCGTCATAA
 
Protein sequence
MYSVKTKSRF TQVSKWTAHI TGRPRTFGLA VGVIFLWMIS GPLFGWSDTW QLVINTSTTI 
ITFLMVFLIQ NTQTRDSEAI QIKLDELIRA TQGAHNALLD LEELEEDELD QIRATYQRLS
ERAREAIRHG LVDTDNPEPE AS