Gene Haur_0265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0265 
Symbol 
ID5732160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp312379 
End bp312945 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content51% 
IMG OID641277389 
ProductdTDP-4-dehydrorhamnose 3,5-epimerase 
Protein accessionYP_001543045 
Protein GI159896798 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes 
TIGRFAM ID[TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.92791 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTTGA CCGTAACGCA AACCGCGCTT GATGGCGTTG TCATTATTAA ACCAAGCGTG 
TTTGCCGATG AACGCGGCTT CTTCCTTGAA ACATACCATC AGATCAAGTT TGCTGACCTC 
GGTCTGCCTA CCGATTTTGT GCAAGATAAT CACTCCCGTT CCAAGCAAGG GGTACTGCGC 
GGGCTGCATT ATCAAGATGA GCGCCAGCCA ATGGCAAAAC TTGTGCGTTG TAGTGTTGGT 
AGCATTTTTG ATGTTGCTGT TGATTTGCGC GTTGGCTCGC CGACCTTTGG CAAATGGGTT 
GGAGTTGAGC TAAGCGCCGA TAACTTTTTA CAATTTCTGA TTCCTTCGGG CTTTGGCCAT 
GGCTTTGTGG TGCTTTCGGA GTTTGCCGAG GTGCAATATC GTTGTACAGG GTTGTATGCG 
CCCGAAACCG AGGGTGCGGT GCGCTGGAAT GACCCACAAA TTGGGATTGA GTGGCCAATC 
AGTGAGCCAA CGCTCTCAGG TCGTGATCAA GCGGCAATGA GCCTCGCCGA CTATCTTGAG 
AATCCTGCGT TTCGTTATCG TGGCTAG
 
Protein sequence
MSLTVTQTAL DGVVIIKPSV FADERGFFLE TYHQIKFADL GLPTDFVQDN HSRSKQGVLR 
GLHYQDERQP MAKLVRCSVG SIFDVAVDLR VGSPTFGKWV GVELSADNFL QFLIPSGFGH 
GFVVLSEFAE VQYRCTGLYA PETEGAVRWN DPQIGIEWPI SEPTLSGRDQ AAMSLADYLE 
NPAFRYRG