| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0229 |
|---|
| Symbol | |
|---|
| ID | 5732124 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 264904 |
|---|
| End bp | 265998 |
|---|
| Gene Length | 1095 bp |
|---|
| Protein Length | 364 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 641277353 |
|---|
| Product | FMN-dependent alpha-hydroxy acid dehydrogenase |
|---|
| Protein accession | YP_001543009 |
|---|
| Protein GI | 159896762 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1304] L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCAAGC CGATTAATCT CCACGAGTAT GAGCAACAGG CAATGACGCT GTTGGATGGC
CCAACCTGCG ATTATTATGC AGGTGGCTGC GAGGATGAAG TGACTTTGCG AGCGAATCTG
CTTTCGTTTG AGCAGGTACG TTTGCGCCCA CGCTTTTTGG TCGATGTGCG TGAAGTCTCA
ACCGCTACAA CTCTGCTAGG CAAGCCGCTT GATTCGCCAA TTTTGGTTGC ACCATCGGCC
TACCATGGCT TGGCCCATGC TGAGGGCGAA TGTGAAACTG CACGCGGTGT GGCTCAAGCT
GGCTCAATTT TCACCGTAAG CACGCTCGCC ACCCGCTCGT TGGAAGAAGT TGCGGCTGCC
GCCGAATGCC CGCTCTGGTT TCAATTGTAT GTCTATCGTG ATCGCAGCGT GTCGGAGCGT
TTGATTGCTC GCGCCGAAGC TGCTGGCTAT CAAGCTTTGA TGTTGACGAT TGATCGCCCG
TGGCTTGGGC GGCGCGAGCG TGAGTTACGC AGTGGTTTTG GCGTGCCTGC TCATCTGAGT
ATGGCCAATT TTCGCGATGT GCCTGCCGCT CAGAACTATC GGCGTGCTGG CCCGAATGCC
TTGCCCGACC CCAAAGCCGA TATGTTCGAT GCTGGGTTAA CTTGGGAATC GATCGCTTGG
TTGCGCTCAG TGACCAGTTT GCCCATCATC GTCAAAGGGA TTTTGACCGC TGAGGATGCG
CTGTTGGCGG CAGAGGCAGG CGCGGCGGCG ATCGTGGTGT CAAATCATGG TGGCCGCCAA
ATTGATGGTA CAGTTACCAC GCTTGAAGCC TTGCCCGAAG TTGTCGCAGC ATTGGCGCAA
AGCCCGTGCG AAATTTATAT CGATGGCGGG ATTCGCCGCG GCAGCGATGC GCTTAAAGCC
TTGGCCTTAG GAGCGCAGGC AATTATGCTT GGGCGGCCAG TCTTATGGGG CTTGGCAGTG
GCGGGTAGTG CTGGGGTTGC CGATGTGCTG ACGACCATGC AGCGTGAATT GCAACGCTCG
ATGGCGCTAT GTGGCCGCCC CAATTTAGCC AGCATCGATC GCAGCTTAGT GCGACCAAGC
GGCATGGTTT TCTAA
|
|---|
| Protein sequence | MSKPINLHEY EQQAMTLLDG PTCDYYAGGC EDEVTLRANL LSFEQVRLRP RFLVDVREVS
TATTLLGKPL DSPILVAPSA YHGLAHAEGE CETARGVAQA GSIFTVSTLA TRSLEEVAAA
AECPLWFQLY VYRDRSVSER LIARAEAAGY QALMLTIDRP WLGRRERELR SGFGVPAHLS
MANFRDVPAA QNYRRAGPNA LPDPKADMFD AGLTWESIAW LRSVTSLPII VKGILTAEDA
LLAAEAGAAA IVVSNHGGRQ IDGTVTTLEA LPEVVAALAQ SPCEIYIDGG IRRGSDALKA
LALGAQAIML GRPVLWGLAV AGSAGVADVL TTMQRELQRS MALCGRPNLA SIDRSLVRPS
GMVF
|
|---|
| |