Gene Haur_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0220 
Symbol 
ID5732115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp256057 
End bp257043 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content51% 
IMG OID641277344 
Producttryptophanyl-tRNA synthetase 
Protein accessionYP_001543000 
Protein GI159896753 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTTCGT TACCACGGGT TTTTTCGGGC ATTCAACCAT CAGGCAATTT GCACCTTGGC 
AACTATTTGG GGGCGATTCA TACCTGGGTG CAAGAGCAAA ATCAATACGA TAATTTCTTC 
TGTATTGTCG ATCTGCATGC GATCACCGTG CCACAAGATC CAGCCGAGTT GCGCAAAAAT 
GTGCGCGATT TGGCCGCGCT GTATCTGGCC GCAGGCATTA GCCTTGAGCA TGCCACGATT 
TTTGTCCAAT CGCATGTGCC AGCTCACGTT GAGCTAGGCT GGATTTTAAA TTGTCAAACG 
CCCTTGGGCT GGTTGAATCG CATGACCCAA TTTAAGGATA AATCGCAAAA GCAAGAAACC 
GTAGCGGCTG GCTTGATGAA TTATCCAACG CTGATGGCTG CTGATATTTT GCTCTACGAC 
ACCCAAGTTG TGCCAGTGGG CGACGATCAA CGTCAGCATA TTGAGCTAAC TCGCGATATT 
GCCGAGCGTT TTAATCATCT TTATGGCGAA ACCTTTGTCA TCCCCGAGGC CTTGATTCGG 
CCTGTGGCGG CGCGGGTGAT GGGCCTCGAC GACCCAACCC AGAAGATGAG CAAGAGCAAC 
AAAGCAGCCA ATCATTCAAT TCCTTTGTTG GGCGATTTGA AGGCAACGCG CAAGGCCATG 
ATGCGGGCAG TCACCGATTC GGGCAGCGAA ATCAAATTCG ACGAAACCCG ACCTGGGGTC 
AACAATCTTT TGGGGATTTA TCAAGCCTTG ACTGGCAAAG ACAAAGCCAC GATTGAGGCT 
GAATTTGAAG GCCAAGGCTA TGGCAAACTC AAAGGTGCAG TTGCCGATGT GGTGATCGCT 
ACCTTGGAGC CATTGCAACA ACGCTACAAT CAACTCACCG CTGATCCAGC TGAACTCGAT 
GGGATTCTCA AACGTGGCGC TGAACGCGCT GCCGAAGTTG CTAACGCTAC CTTGTTACGG 
GCTTATCAAC AACTTGGGCT GCGCTAA
 
Protein sequence
MGSLPRVFSG IQPSGNLHLG NYLGAIHTWV QEQNQYDNFF CIVDLHAITV PQDPAELRKN 
VRDLAALYLA AGISLEHATI FVQSHVPAHV ELGWILNCQT PLGWLNRMTQ FKDKSQKQET 
VAAGLMNYPT LMAADILLYD TQVVPVGDDQ RQHIELTRDI AERFNHLYGE TFVIPEALIR 
PVAARVMGLD DPTQKMSKSN KAANHSIPLL GDLKATRKAM MRAVTDSGSE IKFDETRPGV 
NNLLGIYQAL TGKDKATIEA EFEGQGYGKL KGAVADVVIA TLEPLQQRYN QLTADPAELD 
GILKRGAERA AEVANATLLR AYQQLGLR