| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0218 |
|---|
| Symbol | |
|---|
| ID | 5732113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 251766 |
|---|
| End bp | 253577 |
|---|
| Gene Length | 1812 bp |
|---|
| Protein Length | 603 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641277342 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001542998 |
|---|
| Protein GI | 159896751 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.045822 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGCAG GATTAGATAC CGAAAATTAT GATCGTCAGT ATGGCGACCG CGAATTAATG
GGGCGCATGT TGAGCTATTT TCGTGCTCAT CGGCGCACCG CATTTTGGAC GATAGCCCTG
ATTTGTGGCT TGGGCTTGCT CAATACAATT CCGCCATTTT TGGTCGCTCA AGCCGTTCAG
CGGATTGGTG AAGCCAACCC CGATTGGAAT TTTATCTGGT TGCTTGCCAG TGGTGGGGTG
GTTTTTGGAG TGCTGCAATG GGCCATGGGC TGGTTGCGCC AACGCATGAC CGCTCAAATT
GTGGCCGATG TGATTAGTGC TTTACGCAAT GATGCCTTTA ACGCAGCCAT TAGCCATGAT
CTCTCGTTTT TTGATGAACT GCGGTCAGGT CGAATTATTA GCCGCATCAC CTCAGATACC
CAAGAATTTG CCCAAGTTTC ACGCTTGATC ATCGAAATTG TCAGCCAAGT GCTAACGGTG
ATTGCGCTGT TAGTCTATTT GCTCAGCGTT TCAGTGCCGC TCAGCTTGGG GATTATTGGC
TTCACCCCGA TTGTGATTGG CTTGGCTTTA GGCTTTCGGC GTTTGGCGCG TTTCGTCACC
CGCAAAGGCT TTCAGGTGCT GGGCGAGGTC AATAGCTCAA TTCAAGAAGC GGTAACGGGG
ATTAGCATCG CCAAGAATTT TCGCCAAGAA GCCCGCATTT ATGGTGAATT CAGCGAGATC
AACCAACAAT CGTATGGAGT TAACCTACGA CGTGGTTTTG TGCTCTCGAA TGTGTTCCCA
ACCTTGAACA TTGTTTCAGG CTTTGGCACG GCGGCCTTAA TTTATTGGGG CGGCTTGTCG
GTGATCGATC TCACAATTAG TTTGGCAGCT TGGTATGTCT TTGTGCGCTC GGTTGATCTG
TTTTGGTTTC CATTGCTGAA TATCTCGGCT TTTTGGAGCC AATTTCAAGC TGGCTTGGCG
GCGGCTGAGC GCATTTTTGC CTTGATTGAT GCCGAACATA GCGTCAAACA ACACGATCAG
CAAACCACCA AACGCCTGCG CGGCGAAATT GTGTTCGATC ATGTTGAGTT TCGCTATGGG
CGCAAAGAGC CGGTGCTGAA CGATTTTAGC CTCAATATTG CTCCAGGCGA GAGCATCGCC
TTAGTTGGGC ATACGGGCGC TGGCAAATCG AGTATCGCCA AATTGATCAC CCGTTTCTAT
GAGTTTCAAT CAGGCAAGAT TACGGTCGAT AGCCATGATA TTCGCAGCTT GGATTTGCGC
AGCTATCGTC AGCAATTGGG AATTGTGACC CAAACTCCAT TTTTGTTTGA TGGCACAGTT
GCCGATAACA TTCGCTATGC AGCGCCCCAA CTGAGCGATG CCGAGCTTGA AGCAGTTGCC
AACCAAATTG GCGGCGGCGA ATGGCTGGAA ACCTTGCCCC AAGGCTTGCA ATCGCAAGTT
GGCGAGCGCG GCAATAAACT TTCGCTTGGG CAACGCCAGC TGGTAGCTTT GACGCGGGTC
TTGGCGGCGC AACCAGCGAT TTTTATTCTC GATGAAGCAA CTGCCAGCAT CGACCCATTT
ACTGAAACCC AAATTCAGCA AGCCATGGAT TTGATTCTTT CGCGCTCGAC GGCAATTTTG
ATTGCCCACC GCCTTTCGAC CGTGCGCTCG GCGGATCGAA TTATTGTGTT GAATCAAGGC
CAAATTATCG AAGAAGGCAA CCACGATCAG CTGATGCAGC AAGGCGGGCA TTATGCCGAT
TTATATGATA CCTACTTCCG CCATCAATCG TTGAGCTACA TCGAATCGCG CGGGGCAGTA
CGCAGCGTTT AG
|
|---|
| Protein sequence | MFAGLDTENY DRQYGDRELM GRMLSYFRAH RRTAFWTIAL ICGLGLLNTI PPFLVAQAVQ
RIGEANPDWN FIWLLASGGV VFGVLQWAMG WLRQRMTAQI VADVISALRN DAFNAAISHD
LSFFDELRSG RIISRITSDT QEFAQVSRLI IEIVSQVLTV IALLVYLLSV SVPLSLGIIG
FTPIVIGLAL GFRRLARFVT RKGFQVLGEV NSSIQEAVTG ISIAKNFRQE ARIYGEFSEI
NQQSYGVNLR RGFVLSNVFP TLNIVSGFGT AALIYWGGLS VIDLTISLAA WYVFVRSVDL
FWFPLLNISA FWSQFQAGLA AAERIFALID AEHSVKQHDQ QTTKRLRGEI VFDHVEFRYG
RKEPVLNDFS LNIAPGESIA LVGHTGAGKS SIAKLITRFY EFQSGKITVD SHDIRSLDLR
SYRQQLGIVT QTPFLFDGTV ADNIRYAAPQ LSDAELEAVA NQIGGGEWLE TLPQGLQSQV
GERGNKLSLG QRQLVALTRV LAAQPAIFIL DEATASIDPF TETQIQQAMD LILSRSTAIL
IAHRLSTVRS ADRIIVLNQG QIIEEGNHDQ LMQQGGHYAD LYDTYFRHQS LSYIESRGAV
RSV
|
|---|
| |