Gene Haur_0208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0208 
Symbol 
ID5732103 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp242902 
End bp243648 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content54% 
IMG OID641277332 
Productpeptidase C60 sortase A and B 
Protein accessionYP_001542988 
Protein GI159896741 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3764] Sortase (surface protein transpeptidase) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.784378 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCGGA TATTGTTAAT TTTCGTCGGA TGGAGCTTAG TCGCCTGTGG TGGCACGACC 
AACAATCCCA GTGCAACGGC GGTTGCTAGC CTTGAGCCAA CTTCCCAAGC GCTGGTGGCA
AGTGTTGTGC CAACAAATAC AATTGTGGCA ACGCCTGCTG CTACGCCAAC TCGTTTGCCC
ACCCAAACCG TTGCCCCCGA AGTTACTAGC AAGCCAGTTG AGCTTGATAC GCCAACCCTG
AACGACCAAA ATGCGCCGCC CACCGCTGCG CCGCAGCCAA CCGCCGATGC CAGCAATGCT
CCGAGCCAGC CTGTACGGAT TGTGATCGAC GCGATTGGGC TGGATCTTGC GCCTGTTTCA
GTGGGCTTGG ATCAACGCAA TGTGCCAATT GTGCCCAAAC ACGATGCAGG CTGGTATAAC
CTGAGTGCCC AGCCGGGCCA AGGCGAAAAT GTGGTGTTTT GGGGCCATGT GCTGCGCTGG
AAGGATGCGC CGAATGTTCC AGCTCCCTTT GCGCGGGTCA AAGATGTGGC AATCGATGAG
ACAATCACGG TTTATAGTGC TGATGGGAGT GAATATCGCT ATCGGGTGAC CGAACAAGTC
TGGGTCACAC CTGATCAAGT TCAATATATT TTGCCCGTTG GCTCCGAGCG GCTAACCCTG
GTTTCGTGCA TTGGCGATCA AGTGATTGTT GAAGGCAATT TAGAAATGAG CCATCGCTTG
ATTACGATCG CCGAGCCACT TCGCTGA
 
Protein sequence
MRRILLIFVG WSLVACGGTT NNPSATAVAS LEPTSQALVA SVVPTNTIVA TPAATPTRLP 
TQTVAPEVTS KPVELDTPTL NDQNAPPTAA PQPTADASNA PSQPVRIVID AIGLDLAPVS
VGLDQRNVPI VPKHDAGWYN LSAQPGQGEN VVFWGHVLRW KDAPNVPAPF ARVKDVAIDE
TITVYSADGS EYRYRVTEQV WVTPDQVQYI LPVGSERLTL VSCIGDQVIV EGNLEMSHRL
ITIAEPLR