Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0208 |
Symbol | |
ID | 5732103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 242902 |
End bp | 243648 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641277332 |
Product | peptidase C60 sortase A and B |
Protein accession | YP_001542988 |
Protein GI | 159896741 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3764] Sortase (surface protein transpeptidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.784378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGTCGGA TATTGTTAAT TTTCGTCGGA TGGAGCTTAG TCGCCTGTGG TGGCACGACC AACAATCCCA GTGCAACGGC GGTTGCTAGC CTTGAGCCAA CTTCCCAAGC GCTGGTGGCA AGTGTTGTGC CAACAAATAC AATTGTGGCA ACGCCTGCTG CTACGCCAAC TCGTTTGCCC ACCCAAACCG TTGCCCCCGA AGTTACTAGC AAGCCAGTTG AGCTTGATAC GCCAACCCTG AACGACCAAA ATGCGCCGCC CACCGCTGCG CCGCAGCCAA CCGCCGATGC CAGCAATGCT CCGAGCCAGC CTGTACGGAT TGTGATCGAC GCGATTGGGC TGGATCTTGC GCCTGTTTCA GTGGGCTTGG ATCAACGCAA TGTGCCAATT GTGCCCAAAC ACGATGCAGG CTGGTATAAC CTGAGTGCCC AGCCGGGCCA AGGCGAAAAT GTGGTGTTTT GGGGCCATGT GCTGCGCTGG AAGGATGCGC CGAATGTTCC AGCTCCCTTT GCGCGGGTCA AAGATGTGGC AATCGATGAG ACAATCACGG TTTATAGTGC TGATGGGAGT GAATATCGCT ATCGGGTGAC CGAACAAGTC TGGGTCACAC CTGATCAAGT TCAATATATT TTGCCCGTTG GCTCCGAGCG GCTAACCCTG GTTTCGTGCA TTGGCGATCA AGTGATTGTT GAAGGCAATT TAGAAATGAG CCATCGCTTG ATTACGATCG CCGAGCCACT TCGCTGA
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Protein sequence | MRRILLIFVG WSLVACGGTT NNPSATAVAS LEPTSQALVA SVVPTNTIVA TPAATPTRLP TQTVAPEVTS KPVELDTPTL NDQNAPPTAA PQPTADASNA PSQPVRIVID AIGLDLAPVS VGLDQRNVPI VPKHDAGWYN LSAQPGQGEN VVFWGHVLRW KDAPNVPAPF ARVKDVAIDE TITVYSADGS EYRYRVTEQV WVTPDQVQYI LPVGSERLTL VSCIGDQVIV EGNLEMSHRL ITIAEPLR
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