Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0192 |
Symbol | |
ID | 5732038 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | + |
Start bp | 223097 |
End bp | 225274 |
Gene Length | 2178 bp |
Protein Length | 725 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 641277316 |
Product | hypothetical protein |
Protein accession | YP_001542972 |
Protein GI | 159896725 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00309311 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCG CTGATCCTGC TGCACTGCTT GTCGTTGATA TTGGCACGTT ATTTACTCAC GTGGCGCTGC TCGAACTGGT TGCAGGCGAG TACCGTTTGT TGGGTCGTGC CCAAGCGCTC TCAACCCTGG AGCCACCAAT TGCCGATGCA TGGCATGGTA TTTTGGCCGC GATTCGCGAA ATTGAGCAAT TAACATTCCG TGCGATTGCC CATGTCGATG GTTTGATGAC CCCCCATCGT GCTGATGGTT CAGGTGTTGA TGGTATGGTG GTAACTACTA GCGCTGCTGG TACGTTGCCA ATTGTTTTGG CTGCCATTTC CAACGATACC ACTGGCGCTA GTTTGCGACG GGTTGCCCGT TCGAGCTATA CCACGGTGCT CGATATGGTC ACGCTTGATG AATATGGTGA CCCCGATTTA GCCGAAGGCG AAAGTTGGAT CGATTATCAA TTGGCCAATT TGGTGCGCTT GCCTGCTGCA ACCGTGCTGC TGGCTGGTGG AATCGATGGC GGCAACTCGG CTCCGCTTGA GCGTTTGGCC CACATGCTGG GCTTTACCGT CTTACGGCTT GAACAAATTA ATTCGCGTGA GTTCGCCCAT GTAATTTTTG CGGGCAATAC CGCTGCCTAC CCTGGCATCG AGGAGGCTCT TTCCACGATT GCGCCAATTA CTGCTACTGC GAATGTGTTG CCTGCGATTG GGGTTGAACA ATTGATGCCA GCTCGCTTGG AATTAATTCG TTCGTACAAT GATCGCGTCT TGCCAAAACT GCCAAGTTTC AACCGCATGC GAGCCATGAG CAGCGATATG ATTCGTTGTA CCAGCGATGG TTTTGGTCCA TTGGTGCGCT TTATCGCTAA ACATCATGGC CGGAATACCT TGATTGTTGA TATTGGTGCG ATGACGAGCG CTGGCTATGC TTCCGACGGA ACTCAATTGC ACCTGACCGT CGAGACCAAT TGTGGCACGG CCTATGGCAT TGCGGGCTTG GTCGATAAGG TAGGAGTGAC CAATATCACC CGTTGGCTGC CGTTTGAAAT GAGCGATTCG GCTTTACGCG AACATATGCT CAATCGGCTG ATTCGTCCGC AAATTGTGCC GATTGACCGC GAAAGTTTGT TGATTGAGCA AGCTTTGGTG CGCGAAGCCC TGCGCGTTGT CTCGAACGAT TTGTTTGATG AACAGCCTCA ATTAGCCAGC GATTTGATTA TTGCAACTGG TGGAGCGCTG ACCCACACCA TGCATCCGGC TCAAGCCTTG CTAAGCATCG TTGATGGGCT GGATTTTGGG CGCTTGCAAC AATATCGTGA TCGCAGTTTG CTGATTAGCG ATATTTACCT TGATCGTGAT GGTTTGCTCG CCTTGTGTGG CGCGACTGCT TGGAAATATC CTGATGCAAG TTTTTGTTTG CTCGAACAAG ATGTATTGCG TAATGGTGCT TTAGCCAGCT ATCTGGCGAT CAATAGTTCA TTGCGTTTGG GCGATTTGGT GGCGGAAGTC GAGCTTGTGC CCGTCAGCGG CGCTCCGATC ATCATGCAAA TTCATCATGG TGAGATTCGG CGCTTACCAT TGGCGCTGGG TAAACGTGCT ACCCTGCGTT TGCGCCCAAC CAAACAAGTG CAAATTGGGG CAAATTTACC AGGCGAAGTC GTCGAAACTG GCTTGGCTGC GATTACCGGT AGCGCATTGG GCTTGGTAAT TGATGCCCGC CCACGACCTT TGGCTCAACG CAATAGCGAT ATCCCAAGCC GCAATCAACA ATGGCAATGG CTCAATCAAT TGGGCGTGGT CGATGGGCTT AATCCTTATG CGCCGCAGTA TGATGATCAA CCGCTGCCGT TTGAAATGGC TCCTGCGCTC ACCCGCATTC CCGATCCAGC ACCAGCGCCA GCCCAAATGC TACCTGAACG CGAAGAACCC AATGCGATTC CCGATTGGCT GCGCGAAGAA GGCGAGAACG CCAACGATCT GACCATGCCG CCACCAAGCG ATTTTGGGGT TGAAGAACCC TTACCCGATT GGCTGGGCGG GATGGATGTG CCGGTCAGCA GTGATCCAGT GCTCGATTTG GGTGAACGCC GACCATCGCA ACCAATCGCT CCTGCCGACT TTAGCGCCCT GCGCAACGAG TTGGAAGAAC AAAATAAACC CAAACGTGGC TTCTTCCGCC GCAAGTAA
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Protein sequence | MTTADPAALL VVDIGTLFTH VALLELVAGE YRLLGRAQAL STLEPPIADA WHGILAAIRE IEQLTFRAIA HVDGLMTPHR ADGSGVDGMV VTTSAAGTLP IVLAAISNDT TGASLRRVAR SSYTTVLDMV TLDEYGDPDL AEGESWIDYQ LANLVRLPAA TVLLAGGIDG GNSAPLERLA HMLGFTVLRL EQINSREFAH VIFAGNTAAY PGIEEALSTI APITATANVL PAIGVEQLMP ARLELIRSYN DRVLPKLPSF NRMRAMSSDM IRCTSDGFGP LVRFIAKHHG RNTLIVDIGA MTSAGYASDG TQLHLTVETN CGTAYGIAGL VDKVGVTNIT RWLPFEMSDS ALREHMLNRL IRPQIVPIDR ESLLIEQALV REALRVVSND LFDEQPQLAS DLIIATGGAL THTMHPAQAL LSIVDGLDFG RLQQYRDRSL LISDIYLDRD GLLALCGATA WKYPDASFCL LEQDVLRNGA LASYLAINSS LRLGDLVAEV ELVPVSGAPI IMQIHHGEIR RLPLALGKRA TLRLRPTKQV QIGANLPGEV VETGLAAITG SALGLVIDAR PRPLAQRNSD IPSRNQQWQW LNQLGVVDGL NPYAPQYDDQ PLPFEMAPAL TRIPDPAPAP AQMLPEREEP NAIPDWLREE GENANDLTMP PPSDFGVEEP LPDWLGGMDV PVSSDPVLDL GERRPSQPIA PADFSALRNE LEEQNKPKRG FFRRK
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