| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0185 |
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| Symbol | |
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| ID | 5732094 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 214663 |
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| End bp | 215820 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641277309 |
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| Product | PilT domain-containing protein |
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| Protein accession | YP_001542965 |
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| Protein GI | 159896718 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4956] Integral membrane protein (PIN domain superfamily) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000320699 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGATTT CGGAAAAAAA GGCTGTGGCT GTAAACAGAA ATCGCTTACT TAGCATTGAT
TTTTGGGTGC GCATTTTGGG GATGGTCGTG CTTGGCTATA TTGGCTGGTA TTTTGGCTCT
AGCTCGGCCA GCAATCCACG AACAAGCGAT GAAACCTTAG CCATGCAGCT ACTCACACTT
TCGGGGGCTG GCTTGGGTTT ATTGATATCC CATCGGATAA CCTTATACCC AATTCGCAAT
ATCAACCAAC GCTTGCGTCG TAGCACGGCT CAAGAGTTGA TTGCCTTGGC GCTGGGATCA
TTATTGGGTG TGATGCTCGC AGCATTATTA TCCATCCCCC TAAGCCAACT ACCTGGTCTT
TTAGGCAGCT ATTCGCCGGC ACTTGCCAGT TTCTTTATTA TCTACTTTTG TGTTGTAGCC
TTCGAGTATC ACAAGAAAAA TCTGGTTAAT TTTGGGGTTT CGCTGCAAAC ACCCAAAGTT
CGCGCAGTTA AAGAAGCTGT CCCAATGCGT CGAACCTGTT TGGTTGATAC AAGCGCCATT
ATTGATGGTC GAGTTTTGGC GGTTGTACGC AGTGGGTTTC TTGATGGGAT TTTGGTTGTG
CCGCGCTTTG TGCTCAACGA ATTGCAATTA TTGGCCGATT CGAGCGATGA TATGAAGCGG
ATGCGCGGTC GCCGTGGCTT GGATATGCTC GAAGAAATTC GCAAAGATGA TCAATTGCGG
CTCGAAATGC CCAACGATGA TATTGCCAAT GCGCGTGGCG TTGACCAGAA GTTGGTGACC
TTGGCGCTGC AAGATGGTCA TGCCTTGATT ACCAACGATA AGAATTTGAG CCAAGTTGCT
GAATTACAAG GCGTGCAGGT ACTCAATTTA AATGTGCTTT CCGATGCGGT ACGCCCACCC
GTTGGGGCTG GCGAAATGTT GGTTGTGAAA GTGCGTGAAG AAGGCCGCGA GCGCGAACAA
GGCATTGGCT ACCTCGAAGA TGGCACTATG GTAGTCGTCG AAGATGCCCG CGAACGGATC
GGTGATGAAG TTCGGGTGAT CGTCAGCCGG GTCTGGACGA ACGATCGTGG TCGCATGGTC
TTTGGGCGAA TTATGGGCAG TGCTGGAGCA TTTTACGGGG GCAAAAACGA TGCGGGCAAT
TATCCAGCGC GTAGCTAA
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| Protein sequence | MTISEKKAVA VNRNRLLSID FWVRILGMVV LGYIGWYFGS SSASNPRTSD ETLAMQLLTL
SGAGLGLLIS HRITLYPIRN INQRLRRSTA QELIALALGS LLGVMLAALL SIPLSQLPGL
LGSYSPALAS FFIIYFCVVA FEYHKKNLVN FGVSLQTPKV RAVKEAVPMR RTCLVDTSAI
IDGRVLAVVR SGFLDGILVV PRFVLNELQL LADSSDDMKR MRGRRGLDML EEIRKDDQLR
LEMPNDDIAN ARGVDQKLVT LALQDGHALI TNDKNLSQVA ELQGVQVLNL NVLSDAVRPP
VGAGEMLVVK VREEGREREQ GIGYLEDGTM VVVEDARERI GDEVRVIVSR VWTNDRGRMV
FGRIMGSAGA FYGGKNDAGN YPARS
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