| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0163 |
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| Symbol | |
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| ID | 5732072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 196410 |
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| End bp | 197075 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641277287 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001542943 |
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| Protein GI | 159896696 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000750061 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGCCGAAC CAACTACAGA AATTTTATAT CGCGCTCAAC GCAATGACCC CGAAGCAATG
GGAGCATTGA TTGTTAGCCA ACAACATTAT ATTTACAACA TCGCCATGAG CGTGATGCGC
CAGCCCGAAG ATGCCGCTGA CCTAACCCAA GATGCTTGTA TCAAGCTGTT GCGGGTGATT
GGCCAGTATA ATGGCGAAAG TCGTTTTACC ACTTGGCTCT ATCGTTTGGT GATCAACCTT
GGGCGTGACG AGCTGCGCAA ACGTGGCCGC CGTGCTCCAG AGATGCCACC AATGACCGAT
GACGATGGTG AAACCGTTGA TCCATTATCG AGCATTGCCG ATGATAACCG TTGGGCCGAC
CCGCAAGAAG TGGCAACCAA CCACGAGTTG CGGGCCGAGG TAACCCAAGC CTTGGATAAA
CTGGAAGATC ATTATCGTTT AGCATTAACG CTCTACTATT TTGACGATTT GCGGTACAAT
GATATTGCTG AAATTTTGGA AGTACCGCTG AATACGGTCA AAAGCTATAT TCGCCGTGGT
AAAGAGCGGC TTGCCTTGCT CTTAGGTGCC AATCAATCGG AAGCAATTTT GCCCGCCAAA
CGTGAACCTG TTACCGATGA ACGGCCAAAC CGCGGTCGCT TTGCATTTGC CCTAGGCTGG
CGCTGA
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| Protein sequence | MAEPTTEILY RAQRNDPEAM GALIVSQQHY IYNIAMSVMR QPEDAADLTQ DACIKLLRVI
GQYNGESRFT TWLYRLVINL GRDELRKRGR RAPEMPPMTD DDGETVDPLS SIADDNRWAD
PQEVATNHEL RAEVTQALDK LEDHYRLALT LYYFDDLRYN DIAEILEVPL NTVKSYIRRG
KERLALLLGA NQSEAILPAK REPVTDERPN RGRFAFALGW R
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