| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0150 |
|---|
| Symbol | |
|---|
| ID | 5732059 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 181135 |
|---|
| End bp | 181806 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 641277274 |
|---|
| Product | HNH endonuclease |
|---|
| Protein accession | YP_001542930 |
|---|
| Protein GI | 159896683 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG3440] Predicted restriction endonuclease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.550469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATGA TTAAAAAAGA AATCAAACCT GTTACAGGGA ATTTCTTAAA CAACTTTTGG
GGTATTGGAG CTAAACATGC CCTCTATCAT AAAGATGGAA ATTGGTATCA CCAACTTAAG
AAATTTCCTG GTGTGCTTTT TGATGCCCAT GGGTATATTC TCTTTGAAAC AGATGACGAA
TTTTTTAATT CGCCATCTCT TCGCATACGC AAAGATGTTA GAGTACCACA AGGTATTGCC
TCAATAAAAG AATATATTAA GTTAAGTAAA AATTTACCAA TTGAAACTAT TAGCCGCATT
AAAGTTAACA ATAAGCCAGC AGGAAATCGG TTAACGCGCA GAACAATTAA TACTATTGAT
CGTATTCAGC GAGATACCAA AGTTAGTTCG TGGGTAAAAT ATATTTATAA CTATGCTTGC
CAAATCTGTG GCATCAGGCT CCAAATTGGT CAAGATAAAT TTTATGCTGA ATGTCATCAT
ATTCGGCCAT TAGGTGGAGT TCATCAAGGC GAAGATATTG TAGAAAATGT ATTATGTGTT
TGCCCTAATC ACCATGCTTT ATTAGATTAT GGAGCAATTA GAATCGATTT TTCTACATTA
CACTCCCATC CAAACCATCT AATCGATCCT GAAAGTGTCG ATTATCATAA CAATAATCTA
TCCAACACTT AA
|
|---|
| Protein sequence | MAMIKKEIKP VTGNFLNNFW GIGAKHALYH KDGNWYHQLK KFPGVLFDAH GYILFETDDE
FFNSPSLRIR KDVRVPQGIA SIKEYIKLSK NLPIETISRI KVNNKPAGNR LTRRTINTID
RIQRDTKVSS WVKYIYNYAC QICGIRLQIG QDKFYAECHH IRPLGGVHQG EDIVENVLCV
CPNHHALLDY GAIRIDFSTL HSHPNHLIDP ESVDYHNNNL SNT
|
|---|
| |