Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0148 |
Symbol | |
ID | 5732057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 179641 |
End bp | 180549 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641277272 |
Product | ribokinase-like domain-containing protein |
Protein accession | YP_001542928 |
Protein GI | 159896681 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0524] Sugar kinases, ribokinase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGCAAT CGATTGTTGT TTTTGGCGAT CTTAATCTTG ATACTAGTGT TTCGATTGGG CAATTTCCAC TGCATGAAGG CGATACACTG TTTAGCTTCG ACGGCATTAG CGATGCGATT GGCGGAGCAG CGGCCAATGT TGCGGTTGGC TTAACTGCGC TGGGGCATCA GGTTCATTTT GGCAGCGTGG TCGGCCAAGA TCGCATGGCC GAGCTAGTGC AGCAACTAGC ACAAGCCAAA GGTTTAGCCA CCAACTCCAT TCGCCCCGAT TGGCCAACGA CCTCGCGCAC AGTTGTATTA ATTGATGCTG CTGGGAATCG TCAGTGCATC AACGACCCCA AAGCAGTGCA TCGTTATCGT TACCCCGAAG CGGCGTTACC CACGCTATTT GAACAAAGCC AGTGGGTCTA TTGCTCAACT CAAAACTGGT GTCGTTACGT TGCCCAAGCC GCCCGTGACG CAGGCAGCAC GGTCATTGTC GATGTACAAG CCTTGGTTGA TATTGACGAA TATCACCGTG ATTTTCTGCA AGCTGCTTCG ATTATTATCC TTAGCACCGA GCAACTGGCC ATGCATAGCC ATGAATTCAT GCGCCGCCTA TGGCAACAAT TTGAGATTGA CATCGTGGTA GCAACCCATG GCAATCATGG CGCAACCCTC GGCGTGCGAG CAACCAACAC AATCGAGTAT CAGCCAGCCT TTGAGCTTGG GTCAGTTGTT GATAAAACAG GGGCAGGCGA TGCATTTTGT GCTGGCTTTA TTGCTGGTTT GGCTAGCGAT TTAACTCCAC GCCAAGCTCT GAGTTTTGGG CAATACGTGG CTGCTAGCAA AATCGCAATC AAAGGCTCAA CCAATGGCTT TCCTGAGCGA ACCCATGTGT TGCAAGCATT AGCGCAATTG CCAACATAA
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Protein sequence | MEQSIVVFGD LNLDTSVSIG QFPLHEGDTL FSFDGISDAI GGAAANVAVG LTALGHQVHF GSVVGQDRMA ELVQQLAQAK GLATNSIRPD WPTTSRTVVL IDAAGNRQCI NDPKAVHRYR YPEAALPTLF EQSQWVYCST QNWCRYVAQA ARDAGSTVIV DVQALVDIDE YHRDFLQAAS IIILSTEQLA MHSHEFMRRL WQQFEIDIVV ATHGNHGATL GVRATNTIEY QPAFELGSVV DKTGAGDAFC AGFIAGLASD LTPRQALSFG QYVAASKIAI KGSTNGFPER THVLQALAQL PT
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