| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0105 |
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| Symbol | |
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| ID | 5731998 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 137897 |
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| End bp | 139744 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641277227 |
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| Product | cytochrome c oxidase subunit I type |
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| Protein accession | YP_001542885 |
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| Protein GI | 159896638 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
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| TIGRFAM ID | [TIGR02891] cytochrome c oxidase, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAACTG ACGTAAGTAC CCTCCATCAC GCCCCAGCTA AGCAACGGCG GGGTTGGTTG
GAATGGATCA CCACTGTCGA TCATAAAAAA ATTGGCATCA TGTATGCTGT GACTGCCTTT
TTATTCTTTG TGATCGGTGG GCTTGAGGCG TTGCTCATCC GTTTGCAGCT TGGTACGCCC
CAAAATACGC TGCTGACACC CGAAGCTTAT AACCAAGTCT TTACGATGCA CGGCACAACC
ATGGTGTTTA TGGCGATTAT GCCTGTCAAC GCTGGGTTTA TGAACTATTT TGTGCCCTTG
ATGATTGGCG CAGGCGATAT GGCCTACCCG CGCATGAACG CCATGAGCTA TTGGCTCTTG
TTGTTCGGCG GGATTGTCAT GTATTCCAGC TTTGTGTTCG GCGGCGGCGC TCCCGATGCT
GGCTGGTTTG CTTATGCTCC ACTCACCTCA ACCACCTACT CGGTTACCCG AGGGATGGAT
TATTGGGTGC TAGGTTTGCA GCTGCTGGGG GTTTCCTCGC TGGCTGGCTC GGTCAACATC
ATCGTAACAA TCATCAGGCT ACGAGCACCT GGCATGCGCT TTAATCGGAT GCCGCTGTTC
GTTTGGATGA GCTTCGTTAC CTCATTCTTG TTGATTTTTG CCTTGCCAAG CATCACGGTT
GGGATCACCT TGCTGTTCTT TGACCGCAAC TTTGGTACCA ACTTCTTCTT GCCTGCTGCT
GGCGGCGACC CACTGTTGTG GCAACATTTG TTCTGGTTCT TCGGTCACCC CGAAGTGTAC
ATTATGATTC TGCCCGCCTT CGGTGTGGTT TCAGAAATGT TGCCAGTTTT CTCACGCAAG
CCGATTTTCG GTTACGAGTT TGTGGCCTAC TCTGGGGTTG CAATCGGGGT GTTGGGCTTC
ACCGTGTGGG CACACCACAT GTTTGCCACC AACTTGGGCG TGATTGCCGA CACCTTCTTT
GCTGCCGCTT CGATGTTGAT TTCTGTCCCG ACGGGGGTCA AAATCTTCAA CTGGCTAGCA
ACCTTGTGGC GCGGTGAGTT GCGCTTCAAA ACCCCAATGC TGTTCAGCCT TGGCTTTATC
GCCATGTTCG TGATCGGCGG GATTTCCGGG GTTTCGTTGG CGGCTGCGCC GTTCGACTTA
CAAGTTACCG ATAGCTACTT TGTGGTTGCT CACTTCCACT ATGTGCTGTT TGGTGGCGCT
GTCTTTGCCT TGTTTGGTGC ATCATACTAT TGGTTCCCCA AAATTACTGG CAAGATGATG
AGCGAACGCA TCGGCAAATG GCACTTCTGG ATTTTAATGC TGGGCTTTAA TTTGACCTTC
TTCCCGCAAC ATATGCTTGG GCTGCAAGGT ATGCCACGGC GGGTCTGGAC GTATCAACAA
AACCAAGGCT GGGATTTCTA CAACTTGCTT TCAACGATTG GGGCATTTTG TATCGCCTTG
GGTACGTTGG TCTTTATCGT CAACTTTATT ATCAGCTTGC GCAAGGGCGC TCCTGCGGGC
AACGACCCAT GGGATGCCGC AACCCTGGAA TGGGCGACCA CCTCGCCACC ACCAGCCCAC
AACTTCGATG TGGAATACAT TGTGCATAGC CGTCGCCCCT TGTGGGATAA CAAATATAGC
GGCGAAGGTC GAGGCATGAC GATCAATTAT GATTTCCATC CCCACTTGCC ACCGCCATCG
TTTGCCCCAA TCATCTTCTC GTTTGGCTTG TTTGTGCTAG CTTATGGCAT GCTCAACCTC
GCCTCTGCGC CATTGATTGG GATTCCATTG ATCTTGGTGG CCTTGGCAAT TGCCTTCGTT
GGCATGAACC GCTGGGTCGG CGAAATTGCC CAAGATCCGG TGCTGTAA
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| Protein sequence | MATDVSTLHH APAKQRRGWL EWITTVDHKK IGIMYAVTAF LFFVIGGLEA LLIRLQLGTP
QNTLLTPEAY NQVFTMHGTT MVFMAIMPVN AGFMNYFVPL MIGAGDMAYP RMNAMSYWLL
LFGGIVMYSS FVFGGGAPDA GWFAYAPLTS TTYSVTRGMD YWVLGLQLLG VSSLAGSVNI
IVTIIRLRAP GMRFNRMPLF VWMSFVTSFL LIFALPSITV GITLLFFDRN FGTNFFLPAA
GGDPLLWQHL FWFFGHPEVY IMILPAFGVV SEMLPVFSRK PIFGYEFVAY SGVAIGVLGF
TVWAHHMFAT NLGVIADTFF AAASMLISVP TGVKIFNWLA TLWRGELRFK TPMLFSLGFI
AMFVIGGISG VSLAAAPFDL QVTDSYFVVA HFHYVLFGGA VFALFGASYY WFPKITGKMM
SERIGKWHFW ILMLGFNLTF FPQHMLGLQG MPRRVWTYQQ NQGWDFYNLL STIGAFCIAL
GTLVFIVNFI ISLRKGAPAG NDPWDAATLE WATTSPPPAH NFDVEYIVHS RRPLWDNKYS
GEGRGMTINY DFHPHLPPPS FAPIIFSFGL FVLAYGMLNL ASAPLIGIPL ILVALAIAFV
GMNRWVGEIA QDPVL
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