| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0100 |
|---|
| Symbol | |
|---|
| ID | 5731993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 129796 |
|---|
| End bp | 131118 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 641277222 |
|---|
| Product | type III restriction protein res subunit |
|---|
| Protein accession | YP_001542880 |
|---|
| Protein GI | 159896633 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1061] DNA or RNA helicases of superfamily II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000273539 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGAC CTGCCACCCA AGCCGAGCAG CCAGAGCAAG AACAATGGCT GCTCGACGAG
GCAAGTTTGC TCGATGCAAG CCTGCTTGAT GAACCCGACG AGGATTTGCC AGAGGTTGAT
GCCCGTTTAC AAGGCGGCTT CAAAGCCAAA TTACAATTCG CCCCGCGTCC CTATCAAACC
GAGGCCGTCG CTGCTTGGAC GGCCAACGAA GGACACGGGG TGATTGTGCT GCCCACTGGA
GCAGGCAAAA CGATCACAGC GATGTTGGCA ATTGCCAAGC TTGGGCTGCG CACGCTGATT
GTCGTGCCAA CGATTGAATT ACTCTATCAA TGGCGCGACA CCGTGGTCCA AACCCTCGCG
CTCGATCCAA AATTAGTCGG CGTGGTTGGT GATGGCCAGC GTGAATGGCG ACCAATCACC
GTGATTACCT ATGCTTCGGC GGCCATGCCC GATGCACCAC TTGAAAATTT GGGCTTGCTC
ATTTGTGATG AAGTGCATCA TTTGCCTTCA CCAGCCTATA GCACGATTGC CCTGCGCAGC
CGCACGCCCT ATCGCCTAGG CTTAACCGCC ACACCCGAAC GCAGCGATGG CTCGCATACC
GCGCTTGATC GCTTGGTTGG CAAAGTGGTT TATCAGCGTG CGCCTGCCGA TTTAGCCGAA
GAAGGCCATA TCGCCAAGTT TCGCGAAAAA CGGATTTTGG TCGATCTAAC TGCCGATGAG
TTGGTGCGCT ACGAAACCTT GATGACCACA TGGCGCTGGT TTTTGGCCAA ACATCGGCAT
AAATTGGCCA GCGGCGGCGA TTTCTTCGGC GAACTCATTC GCCGTTCTGG TAGCGACCCC
CAAGCTCGCA ATGCGCTCCA AGCTCAGCAT CAAGCGCGAA TGATTGCGCT CAACGCCGAG
AAAAAGCTTG AGCATGTTGG CCAACTGCTC AGCCAACATC CCAACGATAA AATCATCATC
TTTTCGGAAT ACAACGCCTT GGTCAATACG ATCAGCCGTC AGTTTGCCAT ACCCAGCATT
ACCTATCGCA CAGCTGCTGA TGAACGTAAA TCAATTTTGG ATGGCTTTCG GTCTGGACGC
TATTCCAAGT TGGTGACGGG GCGGGTGCTG AACGAGGGCG TTGATGTTCC CGATGCCAAT
GTCGCGATTG TGGTCAGTGG TTCAGCCACG GCCCGCGAAT ATATTCAGCG TTTGGGGCGG
GTGCTGCGCA AAAAGCCCGA TGAAGCCTTG CTTTACGAGT TGGTCACGCG CAATACCAGC
GAAGTTCAAA CCGCCCGCCG TCGTAAAAAA GCCGTGGCCG CCCATAATCT GCAGGCGAAG
TAG
|
|---|
| Protein sequence | MTRPATQAEQ PEQEQWLLDE ASLLDASLLD EPDEDLPEVD ARLQGGFKAK LQFAPRPYQT
EAVAAWTANE GHGVIVLPTG AGKTITAMLA IAKLGLRTLI VVPTIELLYQ WRDTVVQTLA
LDPKLVGVVG DGQREWRPIT VITYASAAMP DAPLENLGLL ICDEVHHLPS PAYSTIALRS
RTPYRLGLTA TPERSDGSHT ALDRLVGKVV YQRAPADLAE EGHIAKFREK RILVDLTADE
LVRYETLMTT WRWFLAKHRH KLASGGDFFG ELIRRSGSDP QARNALQAQH QARMIALNAE
KKLEHVGQLL SQHPNDKIII FSEYNALVNT ISRQFAIPSI TYRTAADERK SILDGFRSGR
YSKLVTGRVL NEGVDVPDAN VAIVVSGSAT AREYIQRLGR VLRKKPDEAL LYELVTRNTS
EVQTARRRKK AVAAHNLQAK
|
|---|
| |