| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0090 |
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| Symbol | |
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| ID | 5731983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 114888 |
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| End bp | 118160 |
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| Gene Length | 3273 bp |
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| Protein Length | 1090 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641277212 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001542870 |
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| Protein GI | 159896623 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.763002 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGGA ACCAAGCAAT TTTTGACCGT GCGTTAGAAC AATATCAGCT TGCCTCACGT
GCTGGCGATT GGAACAAAGC TTTAACCGAA GCTGCTCGGG CCATGACCGA ATTTCCGACT
CACGAGCAGG CTCGGATTGC TGTCGCCACC GCGTTGTTTC ATACCAATAA GCTTCCACAA
GCGCTGCAAT TGTGGCAGGA GTTGCTCAAG CGCAATCCTG ATAATCCGAT TTTTACCGAA
TATATTGCCA AGATTTATCG CGCCCAAGGC GATACCGACC AAGCGATCGA GTTGTTTATG
CAATTGGCTG AACGCTTGAT CGCCCAAAAA TTGCCTTTGA AGGCAGTGCG AGCTTATCGC
GATATTTTGG ATATTCACCC CAGCCACGAA GAAGCCCGCG TGCGCTTGGC GATGGTACTG
GCTGAATCGG GCGATAAGCC TGGCGCAATC CGTGAATATT TGCATTTGGG TCAGCAATTT
TATGATGCTG AACAATACGA TGCTGCTGAT GAAGCCGCCG TCGAAGCCCT CAATGTTGAC
CCTGCTAGCC TCTCGGCCCA AGAATTCAAG AAGAAAGTTG ATTTGGCACG GCAGGCCTTA
ATCACTGCTG CCACAGGCGA TCAATTGCCC GATCAAGGTC GTTTGCAAAC CAAAGAACAA
ATCGAACGCG CGGTCAATGA GGCGATTGAG TATCAAAATA ATGGGTTGCT GGAGCAAGCC
GCCCAAATGT ATGAACGGGT GGTTGAAGTG CTGCCCGAAC GCGCCGACAT GCAGTATAGC
TTGGGCTTGA TTTACGATGA GCTTGAGCGG CATAAAGATG CCTTGCGGGT GCTCGAAATT
GCCAGCCATA ACGATGAATA CGCCCTCTCT GCCCACTTTG CAATTGGTAC GATCTACCAA
AAGCTGGGCC AAATGGAACG TGCTGCCCAA GAGTTTGAGC AAGCGATTCG CTATGTCGAT
TTGCAATCGA TCGGCAAAGA AGAAGCCAAC GATTTGATCG ATATGTACGA AGCGACCTCG
GCGATTTATC TTGAACTAGG CGATGTGGCG CGGGCAGCCT CGTTGTATTC AACCTTGGCA
GGCTTTTTGC AGGGCAAACG TTGGGGCGCG GAACAAGCGG CGCAATACAA TGCCAAGGCT
AAAGAGCTGA CCGACCGCAG CATGATGTCG AAATTGCGCA TGCTTGGCAC GGGTATTTTG
AATGCGCCGC CACCTGAAGA GGCTGTGCCT GAACCACAGA CCGAAACTTG GGGCAAGATG
CCCTCGATCA CCGATTTCCT CAGTCCCAAA AGTCGCGTCG AAGCCAGCCC AGTCGATGAT
ATGGCCAGCC TTGAGGCCTT GCTTAGCGCT AATACCGGCC CAGCACCCCA AACGATGCTT
ACCGATATTG ATCCGCTTGA TGTGCTGGCC GCCAATTTGC CACCTGCTGG CGAAGTACAT
TTTGCGCCGC TCACGCCAAT TGATACCGAA GGCCGTAGCG AGCGGATTCA GCGTTTGGTT
GAGGCCAGCG AATCGTTTGC CGAGCAAAAT TTCTTGTATG CGGCGCTTGA TGCCTGTCAT
GAAATTATTC GCTACGATCT GGAGTTTTAT GCTATTCACC TGCGGATGGC TGAAATTCTC
GAACGTTTGG GGCGTATGGA TCAAGCGCTC GCCAAACTCA ATTTGTTGAT CGAAACCTAC
AAAGCGCGGG GCGAAACCCA CAAGGCGATT GGGGTCTATC ACAAACTGAT CGATCTTTCG
GCTGATAGCA CGATCATTCG GGCTGAATTG GCTGAGGTGC TACGCAAACA AGGCCGTAGC
GATGAGGCCG CTGAGCAGTT GGCCTATGTT GCCAACCAAC AATTCCGCCA AGGCCAAACC
GTCAAAGCCT TGGAGCAATT TCGCAAGTTG TTGGAATGGG CACCTGATAG CGTCAATTTA
CGTGCTCAAT ATGGCCAAGT GTTGCTCAAA CTCGAACGTT GGGAAGCAGC CTTGGAAGAA
TTCCGCCGAG TTATCGTGCA AAAACCCGAT GATTTGGTGG TGATGGCCCA AGCCAATATT
GCCCTGGCCA TGATGGGCGA ATTCCCCGAT GCGATTTGGG ATTCAGTCGC AGCCTTGATT
CAAAAGCTGG CTAGCAATCC GCAACAGCTT AACGATGTGC AAGCCGAATA TCGCGCCGTC
ACCCTGATTA CTGATCGGGC GATTATTCAG TTTCTCTTGG GCTTGATTCA GCAATCAACC
AAGCAACATC CGGCGGCGAT GCACTCATTC AATCAAGCGC TCGAATTGCT CGAAATTGAT
GCTGATCCCT TGGTTCCGCC AGTGCTGGTC TATCAAGCGA TTGCCGATAG CTACATTGCC
GAGGGTAATG CTGCTGGCTC AATCGAACAG TTGCGCAAAA TCGAGGCGAT TTTGGTGACT
GGCACTGTGC CAGCCATGAG CACCAAGCAT GCCTTTGCCC AACCCTTCAA CGAGGGTGAG
TTGCAACGGC GTTTGGCCGA AGCCTATGCC GCTAATGAGA ATTTCGAAGG CGCAATTCAG
GCCTTGCAAC GGGTCAAGCA ATTGTTGCCC TACGACCGCC AAGCTTACAC CAAATTGGCT
GATATCTACT TCCGCCAAGG CCGCCTAAAC GAAGCCTTGA CCCAACTTGA TGAGTTGGCA
ACTTACTACG AAAGCCAAAG CCAGCTTGAC CGTGCCTTGG AGATTTTGGC CACGGGCTTG
CAATTAGCAC CCAAGAATAT CCCAATCAAA TCGCGCCATG CCCAGCTGAT GATGCGGCGC
GGCTATCTTG ATGAGGGCTT GGTAGGCTTG GATGAATTGG CTGAGTTGCA GCGCAAACAA
GGCTTGGTCA AGGATGCAGT GGCGAGCATT CAGCAAGTCG CTGATGTGTA TTGGACGTTG
GGCAAGGTTG ATAAAGCTGC CGAGATGTAC AACCGAATTG TGCAGATCGC GCCCAACGAC
ACCGAAGCTC GTCAACACTT GGTCAGCTTT AACATTCTTT CGTTGCGCAC CAAGGATGCA
ATTATCCAGT TGCGTGAAAT TGCACGGCTC TCAATTCAGC AACGCAACTA CGAAGAAGCG
ATTGCTTCCT ATCACCAAGT GATTGCGCTC GATCAAAAAG ATGCCGATGC CTACGAGCAA
TTGGCCGATG TGCTGATGCG AGCACAAGAG TATGGTCAGG CCGTGCGTAC CTATAAACAA
TTGGCGAAAT TGTTGCCCGA TGATGATCGG GTCGAAGCTT TGCAAAGCGC CGCCCAACGC
ATGCTTGATC AGCAACAGGT GGCCAAAGGC TAG
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| Protein sequence | MAGNQAIFDR ALEQYQLASR AGDWNKALTE AARAMTEFPT HEQARIAVAT ALFHTNKLPQ
ALQLWQELLK RNPDNPIFTE YIAKIYRAQG DTDQAIELFM QLAERLIAQK LPLKAVRAYR
DILDIHPSHE EARVRLAMVL AESGDKPGAI REYLHLGQQF YDAEQYDAAD EAAVEALNVD
PASLSAQEFK KKVDLARQAL ITAATGDQLP DQGRLQTKEQ IERAVNEAIE YQNNGLLEQA
AQMYERVVEV LPERADMQYS LGLIYDELER HKDALRVLEI ASHNDEYALS AHFAIGTIYQ
KLGQMERAAQ EFEQAIRYVD LQSIGKEEAN DLIDMYEATS AIYLELGDVA RAASLYSTLA
GFLQGKRWGA EQAAQYNAKA KELTDRSMMS KLRMLGTGIL NAPPPEEAVP EPQTETWGKM
PSITDFLSPK SRVEASPVDD MASLEALLSA NTGPAPQTML TDIDPLDVLA ANLPPAGEVH
FAPLTPIDTE GRSERIQRLV EASESFAEQN FLYAALDACH EIIRYDLEFY AIHLRMAEIL
ERLGRMDQAL AKLNLLIETY KARGETHKAI GVYHKLIDLS ADSTIIRAEL AEVLRKQGRS
DEAAEQLAYV ANQQFRQGQT VKALEQFRKL LEWAPDSVNL RAQYGQVLLK LERWEAALEE
FRRVIVQKPD DLVVMAQANI ALAMMGEFPD AIWDSVAALI QKLASNPQQL NDVQAEYRAV
TLITDRAIIQ FLLGLIQQST KQHPAAMHSF NQALELLEID ADPLVPPVLV YQAIADSYIA
EGNAAGSIEQ LRKIEAILVT GTVPAMSTKH AFAQPFNEGE LQRRLAEAYA ANENFEGAIQ
ALQRVKQLLP YDRQAYTKLA DIYFRQGRLN EALTQLDELA TYYESQSQLD RALEILATGL
QLAPKNIPIK SRHAQLMMRR GYLDEGLVGL DELAELQRKQ GLVKDAVASI QQVADVYWTL
GKVDKAAEMY NRIVQIAPND TEARQHLVSF NILSLRTKDA IIQLREIARL SIQQRNYEEA
IASYHQVIAL DQKDADAYEQ LADVLMRAQE YGQAVRTYKQ LAKLLPDDDR VEALQSAAQR
MLDQQQVAKG
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