| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0073 |
|---|
| Symbol | |
|---|
| ID | 5731946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 95172 |
|---|
| End bp | 96338 |
|---|
| Gene Length | 1167 bp |
|---|
| Protein Length | 388 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 641277195 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001542853 |
|---|
| Protein GI | 159896606 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGTA AAGTGAAATT TTTCGCGATT TTCATTGGCA TCGTCGCGTT GTCATTTTTC
TTATTTCGCT CCTGCGATCC TCAAGCGCGT AACCTGCGGC CTGGCTCGAT GTACAACCAA
GGTGGCGACG GAACTGCCGC TTTGCAGCTT TGGCTGAGCA AAATTGGCTA TCAAACTGAG
TCATTTGAAT ATCGCGATTT CGATGAGCTT GACCAAACAA TCGATACTTT GCTTGTAATC
AAGCCAAGCG ATACTAATAA TTGGCGCAAG GAAGAAATTG ATGCGGTTTT AGCGTGGGTT
GAAGATACCG GCGGCACGCT GATTGTCGCT GATGATCAAC AAAATGGCCT TTTGACCCGC
TTGGATCTGA CGGTCACCCG CATCGAAGCC TTGGAAATGG TCAGCACCAG TGATACCAGT
CATGCTTTGG TGAACCCGAT AGTAAACGGT TTGCAAGGCT ATCAAACAAT TAGCTATTTT
GAGCGAGTGA GACCCAATAG CCAAGTGATT GTTGGTAGCG AAGCACAGCC GACGACGCTT
GGCATTAGTC GTGGCCGTGG GATGATCTAT GCTTCAACCA ATATTTGGCT CTTTACCAAT
GCTGGTTTGT TTTATGAAAG CAATGCCAAA ATTATCCTTA ATATGGTTAA TCGGATGCCC
GCAGGCAGTG TAATTGCCTT TGATGAGGTA CATCATGGCC GTGCCTTACC ACCCAAAGCC
GCTCCTGTGC CAGCCCAACC CTATTCGCCT TTGGTTGCGG CGATGGTCTA TAGCGCAATG
GTTGTGGGCT TATGGGCCTT GCTTTCTGGT CGCCGTTTTG GTCAGATTGT GCCCAGCAGA
ATCGATTTGA TGCGACGGAA TAGCAGCGAA TATGTCCAAT CGATGGCCAA TTTGTTTCAG
CGCGGTCGTC AAGCCGAACA TATGCAAGCC CACTATAAAA CCTATCTCAA ACGCCGAGTT
GCTAAGCCCT ATGGGATTAA CCCCAAGCTT GATGACCAGA GCTTTTTAAG TGAAGTTCAG
CGGTATTCCG ATACAATCGA TCGTAATCAC TTAGCTCATT TGCTCAACCA TTTAAGCCAG
CCCAACCCCA GCGAGGCGAC GATCTTGGCC CTGGTCAACG ATATCGATCG CTTTATCAAC
CTATGGGAAC AACAGGGTCG GGCCTAA
|
|---|
| Protein sequence | MNSKVKFFAI FIGIVALSFF LFRSCDPQAR NLRPGSMYNQ GGDGTAALQL WLSKIGYQTE
SFEYRDFDEL DQTIDTLLVI KPSDTNNWRK EEIDAVLAWV EDTGGTLIVA DDQQNGLLTR
LDLTVTRIEA LEMVSTSDTS HALVNPIVNG LQGYQTISYF ERVRPNSQVI VGSEAQPTTL
GISRGRGMIY ASTNIWLFTN AGLFYESNAK IILNMVNRMP AGSVIAFDEV HHGRALPPKA
APVPAQPYSP LVAAMVYSAM VVGLWALLSG RRFGQIVPSR IDLMRRNSSE YVQSMANLFQ
RGRQAEHMQA HYKTYLKRRV AKPYGINPKL DDQSFLSEVQ RYSDTIDRNH LAHLLNHLSQ
PNPSEATILA LVNDIDRFIN LWEQQGRA
|
|---|
| |