| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0065 |
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| Symbol | |
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| ID | 5731938 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 84367 |
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| End bp | 85875 |
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| Gene Length | 1509 bp |
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| Protein Length | 502 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641277187 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_001542845 |
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| Protein GI | 159896598 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.321315 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCTTG CACGTTGGCG TTGGCATCCC CTCACAACGC TTGGGCTGAG TGGGCTGGCG
GCCTTGGCAA TTGTGGCGCT CTATCGGCCC AAACGCTTTG TGCCATTGAT TGGCATTGAT
GAGGCGGCTG CGCATAATTT GCTGTTTGCG CTAGCGTTGT TGGTGTTATT TGCCCTACTG
GCTTGGCTGC GACCCGAAAT TGGCTTGGCT GGAGTGGCCG CGACGATTCC GTTTAACTAT
CGCTCACGCG GCTTTTGGGA TGGCAACTAC CCATTTATTG ATGGCAAATA TTTCCCGTTG
CACGAGTTGT TGCTGTTGGT CGTCTTGGGT GTTACGGCGC TCGATGTTGG TTGGCGCTTG
ATCCAACGCC AAATCGCATG GCAAATGTGG TGGCGTGAAC ATTGGCGCAT GCTGCTGTTG
CCCTTGGCTT GGCTGCTTGT GGCTACATTT GCGGCAAACT TGGCCGTGCC CGAAGGTCAA
GCTGAGGCAT GGCGCGAATG GCGTTGGATG ATTATCGAGC CATTGTTGCT GTATGGCTTG
ATTTTGTATT GGCAACCACG CTACCCAGTG CGGCGCTGGT TACTTTGGGG TTTGCTAGCT
GGCAGCGTAA TTGTGGCGAT CATTGGCATT TTGCAGTGGC GCGACCTCGA TTGGACTCCG
ATTGATGGTA CGGGCATGTG CTTTAGCGAT TTGATTGTTG ATTCTGGCGG CACAAAACGC
ACATCATCGG TCTACTGCCA CCCCAATAAT TTGGCCTTGT GGATGGATCG CGCCAGTATG
TTGGCGGTTG TCGCGGCAGC ATGGGCCTGC TGGCAATGGT GGCGCAAACG CACCTGGCAA
ACGGCTATAT GGTCGTTGCT CTATCTTGGG GCCAGCAGCT TGTTGCTATT AAGTTTGATG
CTAACCTATT CCAAGGGGGC ACGGTTTGCA GTGGCCTTGG TATTGATTGG CCTAAGCTGT
TTGCCGCGCC GCTGGTGGCT ACCGCTGATC ACGAGCGCTG TGCTTGGTGG TTTGTTGCTT
TATTCGTCGT TGAGTGGTCC TGAGCGCTTG AACGTGACGG GCGATTCCAG TTCGGCGCGT
TTGAGTATTT GGCGCTCAGC CACGGCGATG ATTATTGATC ATCCAATTGT AGGCATTGGG
CTTGATCAAT TTTATTTCTA TTTCAATCCA CAATTCAATC GTGGCTATAT CGAGCCACGC
CTTGCCGCCG ACCCTGCCGA GCGTAACACC GCCCATCCGC ACAATTTGCT ACTCGATTTG
TGGTTGCGGG TTGGGATTGC GGGAGTGCTT ATTTTTGCGG CGTTGGCGTG GCGCAGCCTG
CGGCGCACTT GGCAAATTTG GCATAGCGAG CAGCCTGAGC GCTGGTTGGC GTTAGCGGCT
TTGGCGGCCT TGATGGCTGG CTGGTTGCAT GGCGGCGTTG ATCAAGGCTA TTTCTCCAGC
GATTTAGCAA TGGTGACATG GTTAACCCTA GGGATGATCG ATAGCTTCAC CCTAAAAGGT
CAAAATTGA
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| Protein sequence | MMLARWRWHP LTTLGLSGLA ALAIVALYRP KRFVPLIGID EAAAHNLLFA LALLVLFALL
AWLRPEIGLA GVAATIPFNY RSRGFWDGNY PFIDGKYFPL HELLLLVVLG VTALDVGWRL
IQRQIAWQMW WREHWRMLLL PLAWLLVATF AANLAVPEGQ AEAWREWRWM IIEPLLLYGL
ILYWQPRYPV RRWLLWGLLA GSVIVAIIGI LQWRDLDWTP IDGTGMCFSD LIVDSGGTKR
TSSVYCHPNN LALWMDRASM LAVVAAAWAC WQWWRKRTWQ TAIWSLLYLG ASSLLLLSLM
LTYSKGARFA VALVLIGLSC LPRRWWLPLI TSAVLGGLLL YSSLSGPERL NVTGDSSSAR
LSIWRSATAM IIDHPIVGIG LDQFYFYFNP QFNRGYIEPR LAADPAERNT AHPHNLLLDL
WLRVGIAGVL IFAALAWRSL RRTWQIWHSE QPERWLALAA LAALMAGWLH GGVDQGYFSS
DLAMVTWLTL GMIDSFTLKG QN
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