Gene Haur_0040 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0040 
Symbol 
ID5731912 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand
Start bp49590 
End bp51005 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content50% 
IMG OID641277161 
Producthypothetical protein 
Protein accessionYP_001542820 
Protein GI159896573 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATCATT TGCCAACGTT TCGTACATTA GGATTGCTTG GTTTGTTGGG GTTATTGTTG 
GTTGCCATAC AACCGAGCCA AGCCCAACAA CCACTATCAC CAAAAATTAG GCCCGAGCCT
AGCCTGAGCA ATCGGCAGCC ATTGCTTAGT GCAGCCCCGC AAGGTGGCAG TGAATGGCTG
GTTCCTTGTG CTGCCAACGC TGAAAATTGG CAAAGTAGTG TGCGTGAAGA TACAGCTGCG
CTCAATTGCG AAATTTATGT GCCCGAATCG GCCATGATTT TTGTGATGGC GACCGGCAGT
TTTAGCATGC AAACCAATGC TGTAACCAAT ACCTACGAAG GCCGAATTGG CCTAACCCTG
GATGGAGTTT TGCGCGAGAG TAGCAATCGT TGGGGCAATG TTTATGCTTT AGGTCAACTC
AATACTGGCG AAACCAGCAT TTTTGCCAGC ACCACGGTCT TTACGGCCAG TGCCGGGGTG
CACACAGTGA GTTTAGTTGG GGGCTTTGTT GGTTATGGCC CGCTGACCTT GAACAACGCT
CAACTAAGTG TTTTGGCCTT CCCAACCAAC TCGGCTAATA TTCGGGTTTG CGCCACCGAT
ACGGGCTTAG GGGTCTGGCG AGCAACGCCA ACCATGAGCA CCATTCGTTC GTGCAGCTTC
AACTTGCCAA GTAATAGCAC GGTATTTGTC AGCGCCGATG GTTCAGCTTT GCCAATTCCT
GGCAACGAGG TAGCCTTGCA ATTTCGCTTG GGCGTTGATG AGGCTACCAC TGGCGATGTA
CGAACTGATC GCTATGTTGA TGTTGATAGC TTAGAACCAA ATAATGAGCA AATCGATGGC
AATGATATTT CGACTTCGAT TGCCGCTAGC TTCAACCTAA CTGCTGGCAA CCACACCATT
AATTTCTTGG GAAATGGCAG TGGCAGCAAT CAGGCCTATC TGTCGCGCTC AAGTTTGGCA
GTGTTGGCCT TCCCGAGTGG TAGCCCATTC CGTACCTGCA CCAGCATGAA CGATACTAGT
ACCTTTTTCA GCAATAGCGA ATTTAGCTCA TGGGCCAATT GTCTGTTGAC CGTCTCTGGT
GCTCATCGCG GGATTATCGT GGGCAATGTG ACAGTTGGTC AGCAAAATGG CGAGCCGCAA
GTCCGCACCC GTCTGCGAGC CAATACCGAG GTTGTGCTGG GTAGCACGCG CACCAGCGAT
TTGACGATCT TCCGTATGGT TGGCGGTCAA GGCGATGACA AGACTATGAC TTCGGTTGGC
ATGAGCGAAT TGGCTGGCGG CCTGAATATC TTCAATTTTG ATGGCTATCC ATCCAACAGC
AGCACCGTGC GCATGATCGA TCCTAACATT CATGTACTAG CATTTCCCGA CCCATTCAGG
TATAAACAAT ACACGCCATT AGCGCTTGGC GAATAA
 
Protein sequence
MHHLPTFRTL GLLGLLGLLL VAIQPSQAQQ PLSPKIRPEP SLSNRQPLLS AAPQGGSEWL 
VPCAANAENW QSSVREDTAA LNCEIYVPES AMIFVMATGS FSMQTNAVTN TYEGRIGLTL
DGVLRESSNR WGNVYALGQL NTGETSIFAS TTVFTASAGV HTVSLVGGFV GYGPLTLNNA
QLSVLAFPTN SANIRVCATD TGLGVWRATP TMSTIRSCSF NLPSNSTVFV SADGSALPIP
GNEVALQFRL GVDEATTGDV RTDRYVDVDS LEPNNEQIDG NDISTSIAAS FNLTAGNHTI
NFLGNGSGSN QAYLSRSSLA VLAFPSGSPF RTCTSMNDTS TFFSNSEFSS WANCLLTVSG
AHRGIIVGNV TVGQQNGEPQ VRTRLRANTE VVLGSTRTSD LTIFRMVGGQ GDDKTMTSVG
MSELAGGLNI FNFDGYPSNS STVRMIDPNI HVLAFPDPFR YKQYTPLALG E