Gene Haur_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0034 
Symbol 
ID5731906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp42959 
End bp43624 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content50% 
IMG OID641277155 
Producthypothetical protein 
Protein accessionYP_001542814 
Protein GI159896567 
COG category[S] Function unknown 
COG ID[COG2968] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.000849519 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCAA ACCTCTTAAA TGTGAGCAGC AGTTATCGCC AGCTGATTGA CGCTAATCGA 
GCGGAAATAA CCGTGCGGAT CAAAGGCTCG TCGGTGATTA GCAACAATAC CGCCTTGGAA 
AAAGCCAAGG AAGTGCGCCA GTTGGTCGAA GCCTTGACCA GCTATGGCTT GGACAAGACG 
GCCATCCAAC TCCAAAGCGT GGTGGCTGAG GTGAATAATG GCGTGTTGCT GCGCAGTTCG 
AGTGCCACCT ATAGCCTCTT AATTCGCTGC ACCGATTTAG AGCAACTGCC CGATGTGCTT 
GGCATTATCA CCAGCCAAAA ACAAGCCAAT CTCGAACATG TTACGTGGGG CTTTCCCGAT 
GATCCAGCAA TCTTGAATGG ATGGCTACAA GCTGCCTTAG AATTAGCCAA AGCCAAGGCC 
AAAGCAATGG CGCAAACTCT TGGCGTGCGG ATTATCGGCG TGCATCGGGT TGATGATCAA 
TATGGCAGTG AACACCATCC GTATGCCCAA GATGGCGAGT TTCGTAAATC GGCTAGCTTC 
ATGCGCAGTG GCGGTAGCGG AATTAGCAAA GACGATTTGG GCCTTGCCAT GATCCATCGC 
AAACAGATCG AAGTCAATGT CCAGGTTGCT TTTATCATCA GCCCAGATGA GAATTTTACG 
ATCTAG
 
Protein sequence
MEPNLLNVSS SYRQLIDANR AEITVRIKGS SVISNNTALE KAKEVRQLVE ALTSYGLDKT 
AIQLQSVVAE VNNGVLLRSS SATYSLLIRC TDLEQLPDVL GIITSQKQAN LEHVTWGFPD 
DPAILNGWLQ AALELAKAKA KAMAQTLGVR IIGVHRVDDQ YGSEHHPYAQ DGEFRKSASF 
MRSGGSGISK DDLGLAMIHR KQIEVNVQVA FIISPDENFT I