| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0029 |
|---|
| Symbol | |
|---|
| ID | 5731901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 37027 |
|---|
| End bp | 38031 |
|---|
| Gene Length | 1005 bp |
|---|
| Protein Length | 334 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 641277150 |
|---|
| Product | heat shock protein DnaJ domain-containing protein |
|---|
| Protein accession | YP_001542809 |
|---|
| Protein GI | 159896562 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain |
|---|
| TIGRFAM ID | [TIGR02349] chaperone protein DnaJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.00000766624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACA AGGATTACTA CACAATTCTT GGAGTAACAA AAACTGCAAC CGAAGCTGAA
ATCAAAAAAG CCTATCGGAA ATTGGCGCGT CAATATCACC CAGACCTCAA TCCCGGCGAT
TCTGAAGCTG AACGTAAATT TAAAGAAATC AACGAAGCCT ATGAGGTAGT GTCGGACAAA
GACAAGCGAG AGAAGTACGA TCGCTTCGGT GCCGATTGGG GACGCGCCCA AAGTACAGGT
TCGGGGTTTA ATTGGAGTCA ATACGCCTCG CAACCAGGTG GTTTTGGTAG CAACTTTGGC
GGCGATTTCG CCAACGGTGA GTTCTCCGAT TTTTTCGAAA TGTTGTTTGG CAATGCCAGC
CGCCGCCAAA CCAGCGGGGT CTATGGCAAT CGCCGACCAC AACGCGGCCA AAATGTTGAG
CAAGCCATTG ATGTTACTTT AGCTGAAGTG CTCAGTGGTA CCCAACGCAC GCTGCAATTG
CAAGCACCCG AAATGTGTAG CAATTGTGGT GGCAGTGGGG CCAGCCGTGG TAGTATTTGC
CCAACCTGTG GCGGTACTGG TGTGAGCGGC ACAAGCACTC GCACGATCAA TGTGCGCATT
CCTGCCGGAG TCGATCAAGG CTCACGCATT CGCGTTGCTG GCGAAGGCAG CCCTGGCATC
GACCAAGGCA AACGTGGCGA TTTGATGTTG GTGGTCAATC TCGTGCCCGA TAGTCGCTTC
GAGCGCAAAG GCAACGATTT ACATACCGAT CTCGCAGTCG ATTGGCATAC CCTCATCCTT
GGCGGCAAAA TAAAAGTTCC ATTGCCTGAT GGCAAGCAAT TAACCTTAAC GGTGCCTGAA
CAGACCCAAA ATGCTAAAGT GTTTCGTTTG CGCGGCCAGG GCGTGCCCAG CCTGCGCGAT
CAGAACACTC GCGGCGATTT GTTGGTCAAA GTTCAGGCAG TGCTACCAAC CAGCCTGACT
CCCAAACAGC GCGAATTGGT AATGGCTCTA CGGGACAGCG AATAA
|
|---|
| Protein sequence | MDYKDYYTIL GVTKTATEAE IKKAYRKLAR QYHPDLNPGD SEAERKFKEI NEAYEVVSDK
DKREKYDRFG ADWGRAQSTG SGFNWSQYAS QPGGFGSNFG GDFANGEFSD FFEMLFGNAS
RRQTSGVYGN RRPQRGQNVE QAIDVTLAEV LSGTQRTLQL QAPEMCSNCG GSGASRGSIC
PTCGGTGVSG TSTRTINVRI PAGVDQGSRI RVAGEGSPGI DQGKRGDLML VVNLVPDSRF
ERKGNDLHTD LAVDWHTLIL GGKIKVPLPD GKQLTLTVPE QTQNAKVFRL RGQGVPSLRD
QNTRGDLLVK VQAVLPTSLT PKQRELVMAL RDSE
|
|---|
| |