| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0024 |
|---|
| Symbol | |
|---|
| ID | 5736858 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | + |
|---|
| Start bp | 31252 |
|---|
| End bp | 32151 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641277145 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_001542804 |
|---|
| Protein GI | 159896557 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTATACCA ATGCCCATAC TCACTTAGAA CTTAGCGCCT TGGCCGAGGT TTGTCCCACT
GGCCAAGAAT TCGGCTCATG GCTACAAACC ATGCTTGCGC GGCGCATGCA GCTTGATAAC
GCTACCCTCG AACGTGGTAT CCACAAGGCT ATCGAACAAC TCCAGCAAAA CCAAACCACC
ACAGTTGGCG ATATTTCAGC CACCCGATTA AGCATCGAAC CCTTGCTCAG CAGCGGCTTG
GCGGGCGTGG TCTATCTCGA AGTGCTGGGC TTTGATCCAA CGGTGGCGCT GGAGCGATTG
AGCGCCGCCC AACGCGAAAT CGACACATGG CGCAAACGGG AAACCGCCAT GAAAATTGGC
TTGAGCATTC ATGCACCCTA TAGTTGTGCG CCAAGTTTGT TCGAAGCTGC GGCGCGTTGG
TGTCGAGCTG AAGCTGTGCC TTGGGCCATC CACATTGCCG AATCGCCTGC CGAAGTAGCT
TTTTTGCAAC AAGGCATTGG CTCATTACGT GAACTCAACC GCCGCATAAC CCCCCATATC
GAATGGCAAG CTCCGCAATG TTCGCCAATC GCCTATCTCG AACGCTTGGG CGTGCTCGAA
GCCCAGCCTG TGTTAGTGCA TGCCGTCCAA GTCGATGCCC ATGATCTGGC GTTAATTGCT
CAATATGATT GTGCTGTCGT GCATTGCCCG CGCTCTAACC ACAACCTCTT ATGTGGGCGC
ATGCCGCTTG AACAGATGCT GGCCCAAGGC ATTCGGGTTG GCTTAGGCAC TGATAGCCTG
ACCTCCGCCC AATCGCTGGA CATGCGCGAT GAAATTAGCT TTGCTCAGCA ACTTCATGCC
TACAAAGTTG CGCCAAACAT CATTGAACAA TTAGCAACTC AACCGAGCAT TTTGGGCTAG
|
|---|
| Protein sequence | MYTNAHTHLE LSALAEVCPT GQEFGSWLQT MLARRMQLDN ATLERGIHKA IEQLQQNQTT
TVGDISATRL SIEPLLSSGL AGVVYLEVLG FDPTVALERL SAAQREIDTW RKRETAMKIG
LSIHAPYSCA PSLFEAAARW CRAEAVPWAI HIAESPAEVA FLQQGIGSLR ELNRRITPHI
EWQAPQCSPI AYLERLGVLE AQPVLVHAVQ VDAHDLALIA QYDCAVVHCP RSNHNLLCGR
MPLEQMLAQG IRVGLGTDSL TSAQSLDMRD EISFAQQLHA YKVAPNIIEQ LATQPSILG
|
|---|
| |