Gene Haur_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0018 
Symbol 
ID5736852 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand- 
Start bp22004 
End bp22594 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID641277139 
ProductTetR family transcriptional regulator 
Protein accessionYP_001542798 
Protein GI159896551 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACA AAGCCCAAGC TCGCCAGCGC CAAATCTTGG ATGCAGCAGC GATCTGTTTT 
GCACGGCGCG GCTTTCATCA GACCACCATG GACGATATTT GTCGCGAAGT TCAGCTTAGC 
CCAGGCTCGG TCTATCGCTA CTATCGCAGC AAAGATGAAA TTATCGCGGC TTTTGTCGAA 
GACGATAGCC GCGATATGAG CGACTTGTTG CGTCAAGTTG GTGCTCTGCC AAATTTATGG 
CAAGGGCTGG ATTGGCTGGT TGATCAGTTG GTGGCAGCCA TTAATTCACC GCTGTATGCT 
GAGCTTAGCG CCGAAATTGG CTCGGAAACC ATACATAATC CACGGATTGC CAGCTTGGTT 
CGGCAGAGCG ATCAGGCCAA TCATCAAGCA TTGATTGAAT TATTCAGTCT GGCGCAACAG 
CGTGGGCAAT TACCAACCGA TTTAGATTTG CCGCAGATCG CCGATTTAAT CATTATGCTG 
ATCGATGGAC TAACTTGGCG CAAGGGTTTG TATCCGGAAC ATGATTTAAC CCTATATGCC 
GCTGGCCTCA AACACACGAT TAAATATCTG TTGTCTGGCA CTCGATTTTA A
 
Protein sequence
MSNKAQARQR QILDAAAICF ARRGFHQTTM DDICREVQLS PGSVYRYYRS KDEIIAAFVE 
DDSRDMSDLL RQVGALPNLW QGLDWLVDQL VAAINSPLYA ELSAEIGSET IHNPRIASLV 
RQSDQANHQA LIELFSLAQQ RGQLPTDLDL PQIADLIIML IDGLTWRKGL YPEHDLTLYA 
AGLKHTIKYL LSGTRF