| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0014 |
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| Symbol | |
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| ID | 5736848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 16213 |
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| End bp | 18150 |
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| Gene Length | 1938 bp |
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| Protein Length | 645 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641277135 |
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| Product | DNA primase |
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| Protein accession | YP_001542794 |
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| Protein GI | 159896547 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0358] DNA primase (bacterial type) |
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| TIGRFAM ID | [TIGR01391] DNA primase, catalytic core |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0081672 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACTCAG TTATCGACGA TATTAAAGAA CGCATTGACA TTGTGTCGTT CATTAGCGAT
TATGTGCCGC TGCGTAAGGC GGGGCGCAAT TGGGTGGGCT TTTGCCCATT CCATTCGAAT
ACCCGCACGC CAGCTTTTAC GGTGTTTGCC GATAGTAATA GCTACCACTG TTTTGGCTGC
AAAGCCAGCG GCACAATTTT TGATTTTCTG ATGCAGCGCG AGGGCATCGA CTTCCCTGAG
GCACTGAATC AACTTGCGGC CCGCGCAGGA GTGCAATTAC GCCAGCGTAC CGCCCAAGAT
GACCAAGAAG ATGTGCTGCG TTCGCGCATG CTGGAGTTGA ACGCCGCCGC TGCCCGTTTT
TGGAGTCATC AATTATTACA ATCGCCCAAA GCGGCTCATG TGCGTAGCTA CATCGAGCAA
CGTGGGCTTA CCCCGCAAAC TGTTGAGCAA TTTCAGTTGG GCTATGCTAG CGAAGATTGG
TCAAGTTTGC TGGGTTACTT GCACGACCGC CACGGAGCCA ATCCGAGTGA AGTGGCCGAG
GTTGGCTTAG CCTTGGAACG TGAACAGGGC GGCTATTATG ATCGCTTTCG TGGGCGTTTG
ATGTTTCCAA TTCATAATGC CAAGGGCCAG ATTGTAGGCT TTGGTGGGCG GATTTTGGGC
GATGGCCACC CCAAATATAT CAACTCGCCG CAAACCTTGC TGTTTGATAA AAGTAGCCTG
TTGTATGGGC TATTTCAAGC CCGCGAGACG ATTCGCAGCA CTGATAGCGT GGTGGTGGTT
GAGGGCTATG TTGATGTGAT TATGGCCCAT CAAGCGGGCT TTCGCAATGT GCTAGCGCCG
ATGGGCACAG CCTTGACCGA TGTGCATGCC GGCCAACTCA ACAAAATGAC CAAGCGCATC
ACATTGGCAA TGGATGGCGA TGCTGCTGGC CAGTCGGCGG CCTTGCGTGG CTTGGAAACC
TTGCGTGAAA CGCTCGATAC TCATGTGCGG CCTGTGCCAA CTGCTTCGGG CATGTTGCGC
TGGGAGCGCG AGCTTGATGC CACCATCAAG ATTGCCCTGC TGCCTGATGG GCGTGACCCT
GATGATATTG TGCGCAACAA CCCTGAGGAA TGGCGCTCGC TGATTGCCAA TGCTCAGCCG
TTGATGGATT TTTATCTGGC AACTTTGACG AGAGGCTTGG ATTTGAATAG TGCCAAAGGC
AAATCGACAG CAGTCGAGCG CCTTACGCCT TTGCTCAATC AAATTGCCGA TCCAGTTGAA
AAAGCCCATT ATATTCAGCG GCTTGCCAAC CAGATCAAGA TCGATCAGCG ATTAATTGAA
GGATCAATTG GTGGCGACCA ACCAGAGCGT CAGCGCAAAC CCAACCATCG TCAAAGCCGC
CCCGCTGCAC CACCACCAGT TTTTTCAATC TTAGAGCAGG AGGCACGGCG CGAAGATTTT
CTTTTATCGT TATTAATTCG CTTTCCCCAA GTGCAAGCAG TGGTTAGCGA ACAACTACGT
GATGATTTAG CCGCAGCGCC AACCCTGCGC GAGTTGTGGA GTGGCGATGT GAGCGAACTT
TTTGAACGAG TCGAAAATCG TGTATTATGG GATCTGTGGC GCTCAGCCCA GGCGATGGCT
ACTCCCAATC CAATTGAATG GCTTGAAACG GTACCTGCCG AATTGCAAGC CCATGGCGAA
CGCCTACTTA ATTGGGATCA TGCTCCACCA ACCCGTAGTT TCCGTGTGAC TCGTGAGGCC
GAGGAATGTT TGCGCCCGTT GCGCCACCGT TTAGGCAAGC GCTGGAGCGA CCGCCTTGGT
CAGATAATTG CCGCCGCCGA ACCTGATCAA CAGGAACGAT TGCTGGAGCA AGCCATGGCC
ATACAACATT ATTTGCGTGC GACTTCGGAA CCGCGTCGCA GCAGCTATTT TCTTGATACC
CGTGATTCGC TCAAATAA
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| Protein sequence | MNSVIDDIKE RIDIVSFISD YVPLRKAGRN WVGFCPFHSN TRTPAFTVFA DSNSYHCFGC
KASGTIFDFL MQREGIDFPE ALNQLAARAG VQLRQRTAQD DQEDVLRSRM LELNAAAARF
WSHQLLQSPK AAHVRSYIEQ RGLTPQTVEQ FQLGYASEDW SSLLGYLHDR HGANPSEVAE
VGLALEREQG GYYDRFRGRL MFPIHNAKGQ IVGFGGRILG DGHPKYINSP QTLLFDKSSL
LYGLFQARET IRSTDSVVVV EGYVDVIMAH QAGFRNVLAP MGTALTDVHA GQLNKMTKRI
TLAMDGDAAG QSAALRGLET LRETLDTHVR PVPTASGMLR WERELDATIK IALLPDGRDP
DDIVRNNPEE WRSLIANAQP LMDFYLATLT RGLDLNSAKG KSTAVERLTP LLNQIADPVE
KAHYIQRLAN QIKIDQRLIE GSIGGDQPER QRKPNHRQSR PAAPPPVFSI LEQEARREDF
LLSLLIRFPQ VQAVVSEQLR DDLAAAPTLR ELWSGDVSEL FERVENRVLW DLWRSAQAMA
TPNPIEWLET VPAELQAHGE RLLNWDHAPP TRSFRVTREA EECLRPLRHR LGKRWSDRLG
QIIAAAEPDQ QERLLEQAMA IQHYLRATSE PRRSSYFLDT RDSLK
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