| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0013 |
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| Symbol | |
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| ID | 5736847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | + |
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| Start bp | 14745 |
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| End bp | 16076 |
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| Gene Length | 1332 bp |
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| Protein Length | 443 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 641277134 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_001542793 |
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| Protein GI | 159896546 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.204017 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACACG CCGAAGTTCG TCGCATGCCT AATGCCCATG TTTGGCCAAT CAGTGCCAGT
GTTGTTCATG AGCGCTTGCA GATTGCTAGT TGCGATCTGG CGGCGCTAGC GGCTGAATAT
GGAACCCCGC TCTATCTGCT GGATGCTGAG ACGATTCGCA CGATTGCAAT GCGCTATAGT
GCCGCATTAC GCCATGCCTA TGGCAGCAAT GTCAGCATTC ACTATGCCAG CAAAGCCTTG
TTAAATGTAG GCGTGGCGCG ATTAGTGCAT TCCTTGGGCT TGGGGTTGGA TGTGGTGTCA
GGTGGCGAAT TGGCAATTGC CCAACGTGCT GGAATGCCGC TCGACCATGT TCATTTGCAC
GGCAATGGTA CACCACCAGC CGAATTAGCT CAAGCGGTCG AGGCGGGAAT TGGCCGAATT
GTGGTCGATA ATCTTGATCA GCTTAAATGG TTGGCCGATT ATTGCGCCAA ACGCCCAACA
CCCCAAACGA TTCTCTTGCG CATCGCTCCC GATGTAACGG CGGGAGCACA CGCCCATATT
CGCACTGGAG CCGCCAGCGC TAAGTTTGGC ATGCCGCTTG ATGATGGCAC TGCTGCCGAG
GCTGTGCGCT TAGCATTACA AGCACCAGGC TTGAATTTGG TTGGTTTACA CGCCCATATT
GGCTCGCAAA TGCGCGATTG GGCCGCCCTG CGCGAGATGA TTGGGCGTTT GTTGGCCTTT
GCCGATCAGC AACGCCGTGA GCGAAGTTGG CTTTTAACTG AATTCAGCCC GGGTGGTGGT
TTGGCGGTGG CTTACATGCC CAACGAGCAA GCTGGCGATA TCGAAACCTA CGCCAATACG
ATTGCCAATG CTGTGCGTTT AGGCTGCGAA CGCTACCAAA TTCCGCTGCC ACGCTTGATT
ATTGAGCCTG GCCGATCATT GGTGGCGCGG GCTGGCGTGG CTCTGTATAG CGTAACTGGG
CACAAAACGG TGGTCGGTGG TAGCGATTAT TTGCATATTG ATGGTGGAAT GGGCGATAAT
TTGCGGCCTT CGTTGTACAA TGCTCAGTAT ACCGCTGCGT TAGTTGCTCG TCCCTGTGCT
CCGCCGATTG CGCCCGTTCA ATTGGCCGGA AGGTTTTGTG AGTCAGGCGA TGTCTTAATT
CGTGAAGTAG CGTTGCCTGC TGCCGAAGTT GGTGAGCTTG TGGCAGTGCC TGTCGCGGGA
GCCTATACAC TCAGTATGGC CAGCGCGTAT AATGGCGTGC CACGCCCAGC CTTGGTTCTG
TTAGATCGAG GTCAGGCGAT GCTCATTCAA CGCCGCGAAA CCTACGCCGA TTTGATGGCG
CGGGATATTT AG
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| Protein sequence | MEHAEVRRMP NAHVWPISAS VVHERLQIAS CDLAALAAEY GTPLYLLDAE TIRTIAMRYS
AALRHAYGSN VSIHYASKAL LNVGVARLVH SLGLGLDVVS GGELAIAQRA GMPLDHVHLH
GNGTPPAELA QAVEAGIGRI VVDNLDQLKW LADYCAKRPT PQTILLRIAP DVTAGAHAHI
RTGAASAKFG MPLDDGTAAE AVRLALQAPG LNLVGLHAHI GSQMRDWAAL REMIGRLLAF
ADQQRRERSW LLTEFSPGGG LAVAYMPNEQ AGDIETYANT IANAVRLGCE RYQIPLPRLI
IEPGRSLVAR AGVALYSVTG HKTVVGGSDY LHIDGGMGDN LRPSLYNAQY TAALVARPCA
PPIAPVQLAG RFCESGDVLI REVALPAAEV GELVAVPVAG AYTLSMASAY NGVPRPALVL
LDRGQAMLIQ RRETYADLMA RDI
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