| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0012 |
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| Symbol | |
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| ID | 5736846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009972 |
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| Strand | - |
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| Start bp | 12704 |
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| End bp | 14566 |
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| Gene Length | 1863 bp |
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| Protein Length | 620 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641277133 |
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| Product | WD40 domain-containing protein |
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| Protein accession | YP_001542792 |
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| Protein GI | 159896545 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0823] Periplasmic component of the Tol biopolymer transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCGAT TGAAGGTTCG CTTAACTGGT CTACTTAGCG CTTTAGTTAT GGTTGGTACG
TTGTTCAATG GCCATGCCAA CGCTGCTCCA TGGGCCAATC GTTCAGCCTT TGTCTCACCC
AAGTTCGAAG AAGTCTGGCG ACGGTCGGAT GATCCACGGG TTCGTGATGG GCGCTCGTTG
TATTGGGGTT TTGGGCCGTG GTTTGATTAT AACGAATATT ACCGTGAATC GCCAAATGGC
CTACGCCGCG TGCAATACTT CGATAAAGCT CGCATGGAAA TCAATGGAAT CAACGGTAAC
ACCGATGTAA CCAATGGTTT GTTGGTGGTT GAATTAGTAT CAGGCCAATT GAAAACTGGT
GATAACGCCT ATGATAACGC TATTCGCCCT GCTGCCGACC GTGTGCCAGT TGCTGGCGAT
GGCTATCAAA CTAACAGCAA TTCGCCAACC TATGCCTCGT TCGCAGCGGT TTCAACCTAC
AACAACAACG GCTACCGTGA TCCAGATCGC CGCGATCAAT CAATTGCCGA TGCGATCGAT
AAATCGGGCA ATAAATCAAC CCGCAACGAT TTACGCGATG CCTACAAAGA TCAAACCAAA
ATTGTCGTTT ACAACGCGAC AACTGGCCAT AATATTCCGC AAGTATTTTG GGATTTCTTG
AATCGCACTG GCCCAATTAT CGTCAATGGT CAGCGCACCA ATGGCTCAAT CGTCGATTGG
ACCAGCGCCA TGGGCTTGCC AATTAGTGAT CCCTACTGGG TCAAAGCCAC AGTTGGCGGC
GTGCAAAAAG ATCTGTTGGT GCAATTGTTT GAACGACGGA TTTTGACCTA TACCCCAACC
AACGATGCCG CCTATCAAGT CGAAATGGGC AACGTCGGTC AGCACTACTT CCAATGGCGC
TACGGCCATT TGGGAACACC ATGGAATAGC TCAGAACCGA GCTTGCCAAT TGCTTTTGGT
TCAAAGCGCG ATGGTGGAGC CGAATGGGAT ACCTACGCCA TGAACGGCGA TGGCAGCAGC
CAATTGTTGT ATGCTAGCAA CGATAGCAAA GAAACCGTGC CATACTCATG GGTACGTTCG
TGGGACCCAA GCAAAGTTAA ATTGTTCGTC GATTCGCGCC GTGGCAATGG CAGCAATCGC
CAAATTTGGA CGGTCGGCGC TGATGGTACG ATGACCCGTG TGACCTACAC CGACGGTACG
CCCACCCCTC CAGGTGTGCC TTACCAAGGC TATGTTGGCA CTCCATCGAA CGATTTCAAT
GCTTCAGTTT CGCCCGACGG CAGCAAAATG GCCTTTGTCT CAGATCGTTC GGGTAAGCCG
CAAATCTTTG TGAGCTATAC CAACGGGGCC AGCCAAACTC AAGTAACGCT TGATGATTGT
GACCATCAAA CCCCCAGCTG GAGTGCTGAT GGTCGCTATC TCTACTGGGC CTCGAACTGT
GGCACGAACG CCAAATACAA TATTTATCGC GCCGAACTGA ACTGGTTGGC TGATCAACCA
AGTAATGACT ATCCATATCT TTCATTGGAA TTGCGCAACA AGGTCAATTT GACCAACAGC
ACAACCAGCG ATAATGGCTT CCCACGGGTT TCGCCCGACG GCACCAAAAT CGTCTTTACT
TCAAACCGTG ATGGCAACAG CGAAGTCTAT TTGATGAATG CTGATGGCAC GAACCAAACC
CGTTTGACCA ACAGCAGCGC CGAAGATGGT GCTCCTTCGT GGAAACTCGA CGGGACCAAA
ATCGCTTTCG ATAGCAACCG CGATGGCAAC TGGAATGTGT ATGTGATGAA CACCGATGGC
ACTGGTCAAG CACAATTGAC CAACAACAGC GCTGATGATC GCTGGAATGT TTGGGGCCAA
TAA
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| Protein sequence | MSRLKVRLTG LLSALVMVGT LFNGHANAAP WANRSAFVSP KFEEVWRRSD DPRVRDGRSL
YWGFGPWFDY NEYYRESPNG LRRVQYFDKA RMEINGINGN TDVTNGLLVV ELVSGQLKTG
DNAYDNAIRP AADRVPVAGD GYQTNSNSPT YASFAAVSTY NNNGYRDPDR RDQSIADAID
KSGNKSTRND LRDAYKDQTK IVVYNATTGH NIPQVFWDFL NRTGPIIVNG QRTNGSIVDW
TSAMGLPISD PYWVKATVGG VQKDLLVQLF ERRILTYTPT NDAAYQVEMG NVGQHYFQWR
YGHLGTPWNS SEPSLPIAFG SKRDGGAEWD TYAMNGDGSS QLLYASNDSK ETVPYSWVRS
WDPSKVKLFV DSRRGNGSNR QIWTVGADGT MTRVTYTDGT PTPPGVPYQG YVGTPSNDFN
ASVSPDGSKM AFVSDRSGKP QIFVSYTNGA SQTQVTLDDC DHQTPSWSAD GRYLYWASNC
GTNAKYNIYR AELNWLADQP SNDYPYLSLE LRNKVNLTNS TTSDNGFPRV SPDGTKIVFT
SNRDGNSEVY LMNADGTNQT RLTNSSAEDG APSWKLDGTK IAFDSNRDGN WNVYVMNTDG
TGQAQLTNNS ADDRWNVWGQ
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