Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Haur_0009 |
Symbol | |
ID | 5736843 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Herpetosiphon aurantiacus ATCC 23779 |
Kingdom | Bacteria |
Replicon accession | NC_009972 |
Strand | - |
Start bp | 10540 |
End bp | 11025 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 641277130 |
Product | thioesterase superfamily protein |
Protein accession | YP_001542789 |
Protein GI | 159896542 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2050] Uncharacterized protein, possibly involved in aromatic compounds catabolism |
TIGRFAM ID | [TIGR00369] uncharacterized domain 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.239362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCACAC TTTTGGAGCA AACCCAACAA CTTTTGGCCC GCATGGACGA GCGCGAACAG CAATTGGCCC TGACGTTAAT CAAGCGCATC GGCAAGCACC AAGCCCATGG AGCCGGCTTT ACTTGGAGTT TAGGCGTGGT GTATGAGGAT GTTCAGCCTG GCTTCTCGCG TTGCTCATTG CAGATCGACC CAGGCCATTA CAATCCGGCT GGTATCGCTC ACGGCGGCGT AGCCTATAGC CTACTAGATA CCGCCATGGG TGGCGCATTT TGGACTGCGC TCGAACGCCC GTTGGGTTGC GCCACGCTCG AATTGAAAAT TAACTACTTG CGGCCAATCG TTGCTGGCAC AATCATCGCT ACCGCCGAAT TGGTCGAACG CACCACGCGG TTTGGCATTT TGACCGGGCG GGTGGTCAAC GAAGCTGGCG AATTATTGGC TTTAGGTCAA GGCACATTTG CGATTATCAA TTATCCCAAG GAGTGA
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Protein sequence | MTTLLEQTQQ LLARMDEREQ QLALTLIKRI GKHQAHGAGF TWSLGVVYED VQPGFSRCSL QIDPGHYNPA GIAHGGVAYS LLDTAMGGAF WTALERPLGC ATLELKINYL RPIVAGTIIA TAELVERTTR FGILTGRVVN EAGELLALGQ GTFAIINYPK E
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