Gene Haur_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHaur_0006 
Symbol 
ID5736840 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHerpetosiphon aurantiacus ATCC 23779 
KingdomBacteria 
Replicon accessionNC_009972 
Strand+ 
Start bp7580 
End bp8269 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content49% 
IMG OID641277127 
Productcolicin V production protein 
Protein accessionYP_001542786 
Protein GI159896539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones7 
Plasmid unclonability p-value0.0174335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGGTCTAG TCTTCAATGT ATTGTTGCTG GGTATCCCGC TGGGCTTAAC TGTTTTGGGC 
GCGAGCCGTG GAATTCAGCG CGAGGCCATG ACATTAATTG GCATTTTGTT GGGAGCCTTG 
TTGGCCGAAT TGTGGGGGCC AATTTGGGGG CCGAATAATG CAACCCGCTT TAATCAAGAT 
ATTGCCAATA CTACCGCTTG GATTTCGATT ATTCTCTTGC TGGTTTGTAC GATTTTCATT 
GGCTATGGCG GAGCATTGCT GCTGCCTTCG CGCAAGCAAC TGGCCCAAGG CCGCTCACGC 
TGGTTTGGTG CTGGTGCTGG CTTGTTCAAT GGGGTCTTGC TGCTCAGCCT GATTTTGCGC 
TATGGCAATG TTTACAACAA TGACCTTCGG ATTAGTGACT GGGTTGCGAG TAGCCGTGTA 
GCCATGCTGT TTATTGAGCG CTTCCCAACG ATGTTGCTGA TTGGGATTGT GACGATTGCC 
TTGCTGGTAA ATCTGCGTTT ATTGCAGCGC TTAATCTATA AAATTCATGG TAAGGATACT 
AAACCAGAAG AAAAGAAGAA GGCCGAGGAA AAACCTGCTG CCCCACCCCC ACCACCAGAG 
CCAAAGCCCC CAGCTCCCGA TACGGTCAAC AACCCGATTT TGCGCGATTT GATTTTGGCT 
GAGATTAAAA AAGATAAACC ACCAGCCTAA
 
Protein sequence
MGLVFNVLLL GIPLGLTVLG ASRGIQREAM TLIGILLGAL LAELWGPIWG PNNATRFNQD 
IANTTAWISI ILLLVCTIFI GYGGALLLPS RKQLAQGRSR WFGAGAGLFN GVLLLSLILR 
YGNVYNNDLR ISDWVASSRV AMLFIERFPT MLLIGIVTIA LLVNLRLLQR LIYKIHGKDT 
KPEEKKKAEE KPAAPPPPPE PKPPAPDTVN NPILRDLILA EIKKDKPPA