| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Haur_0003 |
|---|
| Symbol | |
|---|
| ID | 5736837 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Herpetosiphon aurantiacus ATCC 23779 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009972 |
|---|
| Strand | - |
|---|
| Start bp | 3605 |
|---|
| End bp | 4564 |
|---|
| Gene Length | 960 bp |
|---|
| Protein Length | 319 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641277124 |
|---|
| Product | peptidase M28 |
|---|
| Protein accession | YP_001542783 |
|---|
| Protein GI | 159896536 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2234] Predicted aminopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.00570901 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCAAC GCCTTTGGTT CCAACGCTTG CTGCAACTTG GCCTGATCAT CAGCCTAACT
GGCTGTGGTG CAACGACTGG AACACCTGTT GCCAATCCAG TTCAAACAGT TGCCGCCACG
AGTGCGCCGA CGATTGTGCC CTTGCCCAAG CCTAGCCTAA CCGAAAGCCC CCAATTCAAC
GGGGCCAACG CCATGGAATT TGCCAAAGTT CAAATGCAAT GGATTCCGCG CGATACGGGC
ACACCAGGCT GGCAAGCTAA CGGCGATTGG ATTGTACAGA CTTTGTTGGA ATATGGCTGG
GATGTTGAAG AACAATTTTT CAACGTGCCC GAAAATAAAA AAGGCCGCAA TATTATCGCC
CGCCGTGGCA CTGGACCATT GGTCTTGCTT GGGGCGCACT ACGATGCTCG CCGTTACGCA
GATAATGATC CCGACCCAAC CAAGCGGATG CAGCCCGTAC CAGCTGCCAA CGATGGAGCC
AGCGGCGTTG CGGTGCTGCT GGAATTGGCG CGGGTACTCA AGCCCGAACG GCTCAACGAG
GAAGTTTGGT TGGTGTTTTT CGATGCCGAG GATAATGGTG GGATTGGCAC ATGGAACTGG
ACGCTTGGCT CAATCGACCT AGCTCCCAAG CTCGAAACCA CGCCCAAAGC TGTGGTGATC
GTCGATATGA TTGGCGATGC TGATCAACAG GTCTACCTGG AGCAAAGCTC AACGCCGGCT
TTACGGGCCG AAATTTGGCA ACAAGCCGCC GATTTGGGTT ATACCACCTT CATTTCGGAA
ACCAAACACC ATATTCTTGA TGATCATACC GCCTTCTTGC AACGCGGCTT TAGCGCCGCC
GACCTAATCG ACTTCGATTA CCCGCATTGG CACACCACCA GCGATACGAT CGATAAGCTC
AGTGCCTCGG CACTAGAAGC AGTCGGTCGC ACGCTCGAAG AGTGGCTCAC CAAGCAGTAA
|
|---|
| Protein sequence | MIQRLWFQRL LQLGLIISLT GCGATTGTPV ANPVQTVAAT SAPTIVPLPK PSLTESPQFN
GANAMEFAKV QMQWIPRDTG TPGWQANGDW IVQTLLEYGW DVEEQFFNVP ENKKGRNIIA
RRGTGPLVLL GAHYDARRYA DNDPDPTKRM QPVPAANDGA SGVAVLLELA RVLKPERLNE
EVWLVFFDAE DNGGIGTWNW TLGSIDLAPK LETTPKAVVI VDMIGDADQQ VYLEQSSTPA
LRAEIWQQAA DLGYTTFISE TKHHILDDHT AFLQRGFSAA DLIDFDYPHW HTTSDTIDKL
SASALEAVGR TLEEWLTKQ
|
|---|
| |