Gene Dshi_4214 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4214 
Symbol 
ID5714743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp61901 
End bp63073 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content64% 
IMG OID641277109 
Productinitiator RepB protein 
Protein accessionYP_001542405 
Protein GI159046737 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGGAGG GACCCTCCAG CACCCGGCTG ACCGGTGCGC TCAAGCGCGG GTCGGTCAAG 
AAGAACGTGG CCGCGATCCA CGTGTCGGGC AAGCTGACCC TGTTGCAGCG CAAGCTGTCC
AATGTGCTGC TGCTTAATGC CTATGACACG CTGACGACCC GGTCGCAGCA TGCGATCGAC
GCGCGGACCC TGTGCCAGAT GATTGGGTAC AATTCGAACG ATATGGAGAC CCTGAAAACG
GCTCTAAGGG GCCTTGCAGA GACGGTTGCG GAGTGGAACA TGCTCGATGC GGCCGGGCGC
GAGGAATGGG GGGTTTCCAG CCTGCTCAGC TATGCCAAGC TGAAGGACGG GGTGTGCGAA
TACGGCTACT CGGCGGCCCT GGCGGAGAAG CTGCACGATC CCAAGGTGTT CGCGCTGATC
AACCTTGATA TCCAGCGGCG GTTCACCTCG GGCCATGCGC TGGCGCTGTA TGAAAACTGC
TTTCGGTTCG TGCGCACCGG GTCCACGGGG TGGTGGTCGC TGGAACTGTT TCGGCGCCTG
ATGGGGGTCG ATGACAGTGA TTATTACAAG AGTTTCAAGC ACCTGAACGC CAAGATCATC
AAGCCCGCCG TGGCGGAGGT GAACCGCACA TCGGACATCT TGGTGACGCC CGAGACCCGC
AAGCAGGGGC GGCAGGTGGC GGAAATCCGG TTTCGGATCG CGCGCAATCC GCAATTGTCG
ATCCTGAATA TCGACGATGG CGGCGCGGTG CGGGCGGGGC CGGTTTATGC CCGGCTGCGC
GCGCTGGGGG TGGGCGACCG GCTGGCACGG CAATGGATCG CCGAGCATGG GGAGGCAGCA
GTCGCGGCCA AGATCGCCTA TGTGGACGGC CGGGACGGTG TGCGTAGTCC GGTGGGCTAC
CTGACTGCGG CGCTGCAAGA GGGCAAAACC CCTGTCGAAG AGCCTGTTTC CGCGCCTGAG
CCGGGCAGTC GTGCCGAGCA GTTGCGCCGG GTGCAGGAAA TCATCGCCCG GCGCAGTCCG
ACCCAGCGCG ATGCCGACCG GCGGCTGTTC ATGAGCCAGC TCGACAGCGC CGAGGCCCGC
ACGGATTTCG AACGCCACGG CTGGATGTCG CCCCTGAACG CAAAGGCGAT CCTGGCGTTC
TGGCAGGAAT TGCAGCCGGA CGCGTTCGGG TGA
 
Protein sequence
MAEGPSSTRL TGALKRGSVK KNVAAIHVSG KLTLLQRKLS NVLLLNAYDT LTTRSQHAID 
ARTLCQMIGY NSNDMETLKT ALRGLAETVA EWNMLDAAGR EEWGVSSLLS YAKLKDGVCE
YGYSAALAEK LHDPKVFALI NLDIQRRFTS GHALALYENC FRFVRTGSTG WWSLELFRRL
MGVDDSDYYK SFKHLNAKII KPAVAEVNRT SDILVTPETR KQGRQVAEIR FRIARNPQLS
ILNIDDGGAV RAGPVYARLR ALGVGDRLAR QWIAEHGEAA VAAKIAYVDG RDGVRSPVGY
LTAALQEGKT PVEEPVSAPE PGSRAEQLRR VQEIIARRSP TQRDADRRLF MSQLDSAEAR
TDFERHGWMS PLNAKAILAF WQELQPDAFG