Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dshi_4214 |
Symbol | |
ID | 5714743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dinoroseobacter shibae DFL 12 |
Kingdom | Bacteria |
Replicon accession | NC_009959 |
Strand | + |
Start bp | 61901 |
End bp | 63073 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641277109 |
Product | initiator RepB protein |
Protein accession | YP_001542405 |
Protein GI | 159046737 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGAGG GACCCTCCAG CACCCGGCTG ACCGGTGCGC TCAAGCGCGG GTCGGTCAAG AAGAACGTGG CCGCGATCCA CGTGTCGGGC AAGCTGACCC TGTTGCAGCG CAAGCTGTCC AATGTGCTGC TGCTTAATGC CTATGACACG CTGACGACCC GGTCGCAGCA TGCGATCGAC GCGCGGACCC TGTGCCAGAT GATTGGGTAC AATTCGAACG ATATGGAGAC CCTGAAAACG GCTCTAAGGG GCCTTGCAGA GACGGTTGCG GAGTGGAACA TGCTCGATGC GGCCGGGCGC GAGGAATGGG GGGTTTCCAG CCTGCTCAGC TATGCCAAGC TGAAGGACGG GGTGTGCGAA TACGGCTACT CGGCGGCCCT GGCGGAGAAG CTGCACGATC CCAAGGTGTT CGCGCTGATC AACCTTGATA TCCAGCGGCG GTTCACCTCG GGCCATGCGC TGGCGCTGTA TGAAAACTGC TTTCGGTTCG TGCGCACCGG GTCCACGGGG TGGTGGTCGC TGGAACTGTT TCGGCGCCTG ATGGGGGTCG ATGACAGTGA TTATTACAAG AGTTTCAAGC ACCTGAACGC CAAGATCATC AAGCCCGCCG TGGCGGAGGT GAACCGCACA TCGGACATCT TGGTGACGCC CGAGACCCGC AAGCAGGGGC GGCAGGTGGC GGAAATCCGG TTTCGGATCG CGCGCAATCC GCAATTGTCG ATCCTGAATA TCGACGATGG CGGCGCGGTG CGGGCGGGGC CGGTTTATGC CCGGCTGCGC GCGCTGGGGG TGGGCGACCG GCTGGCACGG CAATGGATCG CCGAGCATGG GGAGGCAGCA GTCGCGGCCA AGATCGCCTA TGTGGACGGC CGGGACGGTG TGCGTAGTCC GGTGGGCTAC CTGACTGCGG CGCTGCAAGA GGGCAAAACC CCTGTCGAAG AGCCTGTTTC CGCGCCTGAG CCGGGCAGTC GTGCCGAGCA GTTGCGCCGG GTGCAGGAAA TCATCGCCCG GCGCAGTCCG ACCCAGCGCG ATGCCGACCG GCGGCTGTTC ATGAGCCAGC TCGACAGCGC CGAGGCCCGC ACGGATTTCG AACGCCACGG CTGGATGTCG CCCCTGAACG CAAAGGCGAT CCTGGCGTTC TGGCAGGAAT TGCAGCCGGA CGCGTTCGGG TGA
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Protein sequence | MAEGPSSTRL TGALKRGSVK KNVAAIHVSG KLTLLQRKLS NVLLLNAYDT LTTRSQHAID ARTLCQMIGY NSNDMETLKT ALRGLAETVA EWNMLDAAGR EEWGVSSLLS YAKLKDGVCE YGYSAALAEK LHDPKVFALI NLDIQRRFTS GHALALYENC FRFVRTGSTG WWSLELFRRL MGVDDSDYYK SFKHLNAKII KPAVAEVNRT SDILVTPETR KQGRQVAEIR FRIARNPQLS ILNIDDGGAV RAGPVYARLR ALGVGDRLAR QWIAEHGEAA VAAKIAYVDG RDGVRSPVGY LTAALQEGKT PVEEPVSAPE PGSRAEQLRR VQEIIARRSP TQRDADRRLF MSQLDSAEAR TDFERHGWMS PLNAKAILAF WQELQPDAFG
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