| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4203 |
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| Symbol | |
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| ID | 5714704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 50499 |
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| End bp | 51551 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641277098 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001542394 |
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| Protein GI | 159046726 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCA CAGCGATCAC CACCACCACG GCCCTGCTGC TCGGCAGCGC GGCCATGGCG
CAGCAGACCA TCACGATCAA TATCGGCTCC TCGCACCCGG AGGCGAATAT CTGGGTCTAC
GCCATGAAGA ACACCTTCCA GCCCGAGGTG AACCGCATCC TGTCCGAGGC AGGCGGCGAC
TACCAGGTCA ACTGGTCCGA GAACTACGCC GGAACCCTCT ACAAGTTCAC CGATACCCGC
GAGGCGGTGA TGGACGGGAT CGTCGATATC GGCATGGTCG GCACGGTCTG GGAAGGGGCG
AACATGCCGC TCCAGAACGT CACCTACTTC ACCCCCTTCG CGACCGAGGA TCACCGGATG
CTCATCGAGA TCTTCGATGA CCTGTCCCAG TCCCTGCCCG AGTTGCGCGA CAGCTGGTCC
GAGAACGGCA TGGTCCACCT GTCGTCCCTG ATCACCGACA GCTACGACAT CTACGCCACC
TTCCCGGTGA CCTCGATGGA AGACCTGCAG AACCGCAAGC TGAACGCGCC GGGCACCTCG
GCCAACTGGC TGCGCGAAAC CGGCGCGACC CCGGTCGATG GCGCGCTGAC CACCTATTAC
ACCAACATCC AGACCGGCGT GACCGAAGGC ACCCTGTCCT TCGCCTCCGG CATCCTGCCC
ACCCGGGTCT ACGAGGTCGC GCCCGAGCTG ACCCGCGTCG GCATCGGCTC GATGTATTTC
GGGGGCATCG CGGCCAACGA GGACTTCTTC AACGGCCTGC CGGAGCCGGT GCAAACCGCC
CTGCGCGAGG CCGCGCAAGC CACCTCCATC GCCCATGGCG ACTACGTGGC CGACCTCGCC
GCCCGCGCGC TGGAAGAGAT GCAGGCCGCC GGTCTGACCA TCCACGAGCT GCCCGCCGAG
GAAAAGGCGA AATGGGTCGA GAGCCTGCCC AACATCATCG AGCCCTGGCT GGAACAGACC
GGCGAGGCGG GCAAGACCGT GCTGAAGGCC TATTTCGACG CCCTGCGCGA GCGCGGTGCC
ACCCCCGCGC GCGATTGGGA CGCGGGCCTC TGA
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| Protein sequence | MKLTAITTTT ALLLGSAAMA QQTITINIGS SHPEANIWVY AMKNTFQPEV NRILSEAGGD
YQVNWSENYA GTLYKFTDTR EAVMDGIVDI GMVGTVWEGA NMPLQNVTYF TPFATEDHRM
LIEIFDDLSQ SLPELRDSWS ENGMVHLSSL ITDSYDIYAT FPVTSMEDLQ NRKLNAPGTS
ANWLRETGAT PVDGALTTYY TNIQTGVTEG TLSFASGILP TRVYEVAPEL TRVGIGSMYF
GGIAANEDFF NGLPEPVQTA LREAAQATSI AHGDYVADLA ARALEEMQAA GLTIHELPAE
EKAKWVESLP NIIEPWLEQT GEAGKTVLKA YFDALRERGA TPARDWDAGL
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