| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4192 |
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| Symbol | |
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| ID | 5714723 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 38385 |
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| End bp | 38972 |
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| Gene Length | 588 bp |
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| Protein Length | 195 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641277087 |
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| Product | tripartite ATP-independent periplasmic transporter DctQ |
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| Protein accession | YP_001542383 |
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| Protein GI | 159046715 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3090] TRAP-type C4-dicarboxylate transport system, small permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCAAC CAGACACCGA CCGGGATGCA GAGGCCCTCG CGGCCAGGCT CGACCAGTCC
GCCCGCAGAA TGGAGCTTGC CGATCCCGAC GCAGGCCTCG GCCGCCTCGA CCGCGCGATC
AACCGCGTGG TGGAAGCCAT CGGCGTGCTG GCGCTGGTGT TGATCGTCGG CGTCGTCTTT
GCCAACGCCT CGGCGCGCTA CCTGCTGAAT TTCAGTTTCA CCTGGGCCGA GGAGCTGGTG
CAGATGACGA TCCCCTGGCT TGCCATGTCG GGCGTGTTCC TGTCGGTGCG CCGCGGCACG
GTGATCCGGA TCGACTTCTT CTATGAAAAG ATGCCCGCCC GCCTGCGCCC CGTCGTGGCG
CGCGCCGGTC TGGCCTTCAA CTGCCTGGTG CTGGCGGTCA TGGCCTATGT CTCCTTCGAC
TTCGTCCGGC TCTTCGGCGG GGACAAGACC CTCTATGTCG GGCTGCCCAC GGGTGTCTCC
ACCTCCGCCC TGGTGTTCGG CGCCGCGGGC GTGGCCATGG CGTATGCCGC CGCCTTCGTC
AGCGCCTTCC TCGGCCGGAC GACCAACCGG AACGGACATA CCCCATGA
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| Protein sequence | MTQPDTDRDA EALAARLDQS ARRMELADPD AGLGRLDRAI NRVVEAIGVL ALVLIVGVVF
ANASARYLLN FSFTWAEELV QMTIPWLAMS GVFLSVRRGT VIRIDFFYEK MPARLRPVVA
RAGLAFNCLV LAVMAYVSFD FVRLFGGDKT LYVGLPTGVS TSALVFGAAG VAMAYAAAFV
SAFLGRTTNR NGHTP
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