| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4189 |
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| Symbol | |
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| ID | 5714720 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 34761 |
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| End bp | 35777 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641277084 |
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| Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
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| Protein accession | YP_001542380 |
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| Protein GI | 159046712 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.623523 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCTTA GCAAGATGAC CGGATCGCTC CTGGCCGGCG CGGGCCTCGC CGCGCTGCTG
GCCGGCAGCG CCACCGCCAA GGAGTTCGAC CTGAGCGGCA CCGAGGTGAC CATCGGCACC
GCGCAGGCGC AGGTCCTGAA CCTCGGCACC CTGCGGATGA TCGAGATGCT CACCGAATGG
GGTGCCGATG TCACCCGGGT GGAGCTGCCC AATATCTCGG GGCTCGAAGC CATTGTCGCG
GACCGGATCG ACATCGCCTC GCGCAGCTCG GACGAGATCC TCGCGGGTCA GTCGCGCGGC
GTCGACGTGG TGGCCTTCGC GGCGCCGATC TCCACCATGC ACTATGCCGT GGTCTCGACC
CCGGGCATCG ACTCCCTCGA AGACCTGCGG GGCCAGTCCA TCGCCACCAG CGGCCCCGGC
GGCTTCAACG GCATGCTCTT TCGCTACATG CTGACCCAGG CCGGGCTCGA GCCCGAGGTC
GACGTGGCCA TCGTCCCCGT GGGCGGGTCC AGCGAGCGGG CCGCCGCGAT CATGGCCGGG
CAGGTGCAGG CGACGGTCGT GTTCATCGAC AACTGGCTCG CCCTGCGGGA ACAGGGCGCG
AATGCGCAGC TTCTGGGCTA CGTGGCCGAC CTGGTACCGG GCCTGTCCTC GCGCGCCGTC
TTCGCCCCGC GCGACTACCT GGCCGCCAAC GAGGACCTGG TGACGGCCAT CGCCTGCGCG
AACCTCGAAG TGAACGCCTG GATCAATTCC AACAAGGACG ACTTCGTCGC CTACGCCATG
GACAATGTGC GCGGCGCCAA CGAGGACGCG GTCTCGGCCT TCTACGACGT GGCGATGGAG
ATCAACATGT TCCCCACCGC GCCGCGCGAA CTGCTGGATG TCTCCGGCTA CCAGGCGCTG
GCCGACCTGA TGTACGCGGG CGGGGAGCTG GACGACCAGC TCGATGCCAG CGGCTTCGTC
GACTTCACCT ATGTGGACCG GGCCGCCGAA ATGGGCTGCG GCACCGGCGC GATGTAA
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| Protein sequence | MTLSKMTGSL LAGAGLAALL AGSATAKEFD LSGTEVTIGT AQAQVLNLGT LRMIEMLTEW
GADVTRVELP NISGLEAIVA DRIDIASRSS DEILAGQSRG VDVVAFAAPI STMHYAVVST
PGIDSLEDLR GQSIATSGPG GFNGMLFRYM LTQAGLEPEV DVAIVPVGGS SERAAAIMAG
QVQATVVFID NWLALREQGA NAQLLGYVAD LVPGLSSRAV FAPRDYLAAN EDLVTAIACA
NLEVNAWINS NKDDFVAYAM DNVRGANEDA VSAFYDVAME INMFPTAPRE LLDVSGYQAL
ADLMYAGGEL DDQLDASGFV DFTYVDRAAE MGCGTGAM
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