| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4188 |
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| Symbol | |
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| ID | 5714719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 33904 |
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| End bp | 34665 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641277083 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001542379 |
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| Protein GI | 159046711 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.605397 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA CCCTCTCCCG CCCCAGCGTT CTGCTGCCGC TCCTGAGCCT CGTGGTCGTC
TTCGGCGCCT GGGAGCTCGT AGGCCGCAGC ATCAATCCCC TGCTCTTCGC GCCGCCCTCC
GAAGTGGCCC GGCAGTTCGG TGAACTGATG CGCAGCGGCG AGCTTCTGGA CGCGACCAAG
ATCACCGTGC AGGCGCTGTT CCTGGGCTAT TTCCTCGCGG TGATCGTCGG CATTCCCTTC
GGGATCGCCA TGGGTGCCTT GCCCCGGTTC GGCGATATCC TGCAGCCCTA TCTTTATGCG
ATCTTCTCGA CCCCGCGCGT GGTGGTCGTG CCATTGATCG TGGTTTGGTT CGGAATTGGT
TTCGAGGCCC GGCTGTTTCT GGTGTTCTTC TGGTCGATGA TCGCGATCAG CGTGAACACC
GCCCAGGGCG TCCGCCACGC GCGCCCCGAC CTGGTCGAGG TCGCGCACTC CTTCCAGGCC
TCCCGACTCC AGATGGCCCG CCATGTGCTG ATCCCCGGCG CGATCCCCTT CGTGGTCTCG
GGCCTGCGGA TCGGGGCGGA ACGCGCCATC GTGGGCGTCA TCATCGGCGA GATGTTCTTG
CAGATCGTCG GCCTCGGCGG CGTGATCACC AAGGGCAGCA CCGAGCTTCT GCCGGCCAAG
ATGCTCTGCG CCGTCGCCGT CATCGCCGTG CTCGGCACGA TCATCGTGAC CGCGCTCGAC
ACGTTCGAAA AACGCTTTCA GGTCTGGAAA GGGCCGACCT GA
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| Protein sequence | MMKTLSRPSV LLPLLSLVVV FGAWELVGRS INPLLFAPPS EVARQFGELM RSGELLDATK
ITVQALFLGY FLAVIVGIPF GIAMGALPRF GDILQPYLYA IFSTPRVVVV PLIVVWFGIG
FEARLFLVFF WSMIAISVNT AQGVRHARPD LVEVAHSFQA SRLQMARHVL IPGAIPFVVS
GLRIGAERAI VGVIIGEMFL QIVGLGGVIT KGSTELLPAK MLCAVAVIAV LGTIIVTALD
TFEKRFQVWK GPT
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