| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dshi_4185 |
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| Symbol | |
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| ID | 5714716 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dinoroseobacter shibae DFL 12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009959 |
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| Strand | + |
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| Start bp | 31537 |
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| End bp | 32229 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641277080 |
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| Product | GntR domain-containing protein |
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| Protein accession | YP_001542376 |
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| Protein GI | 159046708 |
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| COG category | [K] Transcription |
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| COG ID | [COG2186] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.440271 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCTGACAC GCACCGACCA ACCGGAACGC GACGAATGTG CGGAACGCCT GCGGGCCCTC
ATCGCCGAGG GCGGCTACGC GCCCGGCGAC AGGATCCCGC CCGAGCGCCA ACTGATCGAA
ATGATGGGCA TCACCCGCGC CGGCCTGCGC CGGGCGCTCG ATTTCCTCGA ACGCGACGGG
GTCATCTGGC GCCATGTCGG CAAGGGCACC TTCGTCTCCT ACGGCGCGAC CGATGCCGTG
ACCGAGGACG CCTTCGCCGG CATCGGCAAC CAGCTCAGCC CCTACCGCAT GATGCGCGCG
CGGATCTGCG TCGAGCCCGC CATCGCGCGG GAAGCGGCGG TCTATGCCTC GCGCGAACAG
GTGGCCAGGA TCGACGCGGC GGCCAAGCGG GCGCGCGCCG CGGCAAGCTG GTCGGAATAC
GAGCGCCAGG ATGACCAGTT CCACCGGGCC GTGGCCGAAG CCGCCGACAA CGCCCTGCTG
CTGGCCCTGT TCGACAGCCT GAACCGGGTG CGGCGCGAGG TGGCCTGGGG CGCGGTCACG
CGGTCCAATG CCCGGCCGCC GCGCGACCAT TCCAGCTTTG CCGAGCATGA CGCGATCTGC
GCCGCCCTCG CCGCCCATGA CGCGGATGCC GCGTTCCAGG CCATGCGCGC GCATCTGCAA
TCGGTGTCGT CGCGCCTGTT CGAGGGCATC TGA
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| Protein sequence | MLTRTDQPER DECAERLRAL IAEGGYAPGD RIPPERQLIE MMGITRAGLR RALDFLERDG
VIWRHVGKGT FVSYGATDAV TEDAFAGIGN QLSPYRMMRA RICVEPAIAR EAAVYASREQ
VARIDAAAKR ARAAASWSEY ERQDDQFHRA VAEAADNALL LALFDSLNRV RREVAWGAVT
RSNARPPRDH SSFAEHDAIC AALAAHDADA AFQAMRAHLQ SVSSRLFEGI
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