Gene Dshi_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDshi_4176 
Symbol 
ID5714691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDinoroseobacter shibae DFL 12 
KingdomBacteria 
Replicon accessionNC_009959 
Strand
Start bp25262 
End bp25924 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content68% 
IMG OID641277071 
Productoxidoreductase FAD/NAD(P)-binding subunit 
Protein accessionYP_001542367 
Protein GI159046699 
COG category[C] Energy production and conversion 
COG ID[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0565663 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCACA AGATCACGCT TCTGGAAACC GTGGAGCTGA CACCGGACAC GCGCCATTAC 
GTCTTCACCA GGCCCGAGGG CTACGGGTTC ACCCCGGGCC AGGCGACGGA TTTCGCACTG
GACCGGTACG GCTGGCGCGA CGCGACGCGG CCCTTCACCT TCACCGGCGA CCCCGAGGCC
GATGTGCTGT GCTTCACCAT CAAGACCTAT GCCGACCGCG AAGGCGTCAC CGACGCGCTG
TGGTCCGCGA CACCGGGCGA CGGGGCGCTG ATCGGCGACC CCTGGGGGGC CATTTCCGAC
AAGGGGCCGG GGGTGTTCAT CGCGGGCGGC GCGGGCATCA CGCCGTTTCT GGGCATTCTC
AAGGCCCGCG CCCGGGCCGG GCAACTCGAC GGCGCCACCC TGATCTTCGC CAATGGCGGT
CCGCGCGACA TTATTTTCCG CCCGCTCTGG GACAGTCTGA AGGGGCTGAA AACCGTCTAT
GCCGTGTCCG AAGACGGGGC CGGGTTCGCC TACCGGCGAA TCACCGGCGA GATGCTGGAG
GCCGAGATCG ACGACTGGGA CCAACGCTTC TATGTCTGCG GCCCGCCCCC GATGGAGGAG
GATGTGGTCG CGATGCTGAC CGCGCGCGGC GTCCCCGAGG ACAGCATCAT CCGCGAGGCG
TAA
 
Protein sequence
MTHKITLLET VELTPDTRHY VFTRPEGYGF TPGQATDFAL DRYGWRDATR PFTFTGDPEA 
DVLCFTIKTY ADREGVTDAL WSATPGDGAL IGDPWGAISD KGPGVFIAGG AGITPFLGIL
KARARAGQLD GATLIFANGG PRDIIFRPLW DSLKGLKTVY AVSEDGAGFA YRRITGEMLE
AEIDDWDQRF YVCGPPPMEE DVVAMLTARG VPEDSIIREA